RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
LIG1-219ENST00000600055 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.36
LIG1-219ENST00000600055 RHBDD3Q9Y3P4 386 aa12.83□□□□□ -0.36
LIG1-219ENST00000600055 NPTNQ9Y639 398 aa12.83□□□□□ -0.36
LIG1-219ENST00000600055 CSPG4Q6UVK1 2322 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 LOC100289279A0A1B0GTE1 492 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 ISPDA4D126 451 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 ACOD1A6NK06 481 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 FAM157AC9JC47 383 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 J3QRE1 110 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 CASQ2O14958 399 aaPredicted RBP12.82□□□□□ -0.36
LIG1-219ENST00000600055 GMDSO60547 372 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 ZNF205O95201 554 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
LIG1-219ENST00000600055 KRT8P05787 483 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 DDOSTP39656 456 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 ZNF91Q05481 1191 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 OR8B8Q15620 311 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 MPPED2Q15777 294 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 PACRGLQ8N7B6 248 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 YIPF7Q8N8F6 280 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 OR51E1Q8TCB6 317 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 HPS1Q92902 700 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 LGALS12Q96DT0 336 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 SLC22A4Q9H015 551 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 G6PC2Q9NQR9 355 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 NUFIP1Q9UHK0 495 aaKnown RBP12.82□□□□□ -0.36
LIG1-219ENST00000600055 R4GMQ9 66 aa12.82□□□□□ -0.36
LIG1-219ENST00000600055 A0A0U1RQV5 110 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 METTL15A6NJ78 407 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 LOC110117498-PIK3R3F6TDL0 507 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 TMEM178BH3BS89 294 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 MPZL2O60487 215 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 TGFAP01135 160 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 IGHV2-70P01814 119 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 TTRP02766 147 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 DBTP11182 482 aaKnown RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 GATA4P43694 442 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 IL5RAQ01344 420 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 TP53I3Q53FA7 332 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 FAM201AQ5SY85 155 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 ZNF691Q5VV52 312 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 LIPNQ5VXI9 398 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 FAM71F1Q96KD3 344 aaPredicted RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 GPR84Q9NQS5 396 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 OR52A1Q9UKL2 312 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
LIG1-219ENST00000600055 EXOGQ9Y2C4 368 aaKnown RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 NOP16Q9Y3C1 178 aaKnown RBP12.81□□□□□ -0.36
LIG1-219ENST00000600055 YLPM1P49750 1951 aaKnown RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 MTORP42345 2549 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 DAPL1A0PJW8 107 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 A8MV72 311 aaPredicted RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 FAM20BO75063 409 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 WBP4O75554 376 aaKnown RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 IGLV3-1P01715 115 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 GRPP07492 148 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 HOXB4P17483 251 aaPredicted RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 PSMB10P40306 273 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 CDH15P55291 814 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 ADARB1P78563 741 aaKnown RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 ZMYND11Q15326 602 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 BCL2L15Q5TBC7 163 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 WDR86Q86TI4 376 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 COMMD2Q86X83 199 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 CELF2-AS1Q8N7Q2 184 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 LINC01356Q8N9X3 169 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 CNIH3Q8TBE1 160 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 C1orf159Q96HA4 380 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 Q96MT0 163 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 GAL3ST1Q99999 423 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
LIG1-219ENST00000600055 ZNF665Q9H7R5 613 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 LPAR2Q9HBW0 351 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 UBAP1Q9NZ09 502 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 GNG8Q9UK08 70 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 MYRFQ9Y2G1 1151 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 TANC2Q9HCD6 1990 aa12.8□□□□□ -0.36
LIG1-219ENST00000600055 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
LIG1-219ENST00000600055 SNTNA6NMZ2 147 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ZNF850A8MQ14 1090 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 P2RY10O00398 339 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 SULT1C4O75897 302 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
LIG1-219ENST00000600055 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 GNALP38405 381 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 BTG1P62324 171 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 PRDX4Q13162 271 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 ODF4Q2M2E3 257 aa12.79□□□□□ -0.36
LIG1-219ENST00000600055 TTC23Q5W5X9 447 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms