RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 FNDC9Q8TBE3 224 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 AQP3Q92482 292 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 SGK3Q96BR1 496 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 GINS4Q9BRT9 223 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 TINAGL1Q9GZM7 467 aaPredicted RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 TAS2R8Q9NYW2 309 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ZNF224Q9NZL3 707 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 B4GALT7Q9UBV7 327 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 MRPS28Q9Y2Q9 187 aaKnown RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 V9GYS6 101 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ZNF292O60281 2723 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 DHRS3O75911 302 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 CST2P09228 141 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 ACKR3P25106 362 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 GLDNQ6ZMI3 551 aaPredicted RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 TMPRSS7Q7RTY8 843 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.65□□□□□ -0.38
VRK3-217ENST00000599538 TUSC5Q8IXB3 177 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 NUDCD2Q8WVJ2 157 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 LPAR5Q9H1C0 372 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.38
VRK3-217ENST00000599538 A0A1B0GUH1 482 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 METTL21EPA6NDL7 271 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 CDRT15L2A8MXV6 281 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 RGS13O14921 159 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 NKX2-8O15522 239 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 NME2P1O60361 137 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 TGM6O95932 706 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 ERCC1P07992 297 aaPredicted RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 NME2P22392 152 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 TNK1Q13470 666 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 RAB35Q15286 201 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 RNFT1Q5M7Z0 435 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 FGD2Q7Z6J4 655 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 OR1F12Q8NHA8 337 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 ZFAND1Q8TCF1 268 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 SPTSSAQ969W0 71 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 WDR89Q96FK6 387 aaPredicted RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 IP6K3Q96PC2 410 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 WNT5BQ9H1J7 359 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 FAM86C1Q9NVL1 165 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 PIGLQ9Y2B2 252 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 NOSIPQ9Y314 301 aaKnown RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 A0A0A6YYH2 397 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 A6NJ64 397 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 SULT1C2O00338 296 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 SOCS1O15524 211 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 MPIG6BO95866 241 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 ANXA3P12429 323 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 FAUP35544 74 aaKnown RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 PPIAP62937 165 aaKnown RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 FJX1Q86VR8 437 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 GPER1Q99527 375 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
VRK3-217ENST00000599538 CA10Q9NS85 328 aa12.64□□□□□ -0.39
VRK3-217ENST00000599538 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 MEIKINA0A087WXM9 373 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 FAM172BPA6NC97 362 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 LINC01387J3KSC0 135 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
VRK3-217ENST00000599538 RAB3DO95716 219 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 CSN2P05814 226 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 HTR5AP47898 357 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 ACTBP60709 375 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 ACTG1P63261 375 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 KISS1Q15726 138 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 PLAC9Q5JTB6 97 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 PDSS1Q5T2R2 415 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 METTL11BQ5VVY1 283 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 OR52W1Q6IF63 320 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 SLC16A14Q7RTX9 510 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 SLC36A1Q7Z2H8 476 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 ASCC1Q8N9N2 400 aaKnown RBP12.63□□□□□ -0.39
VRK3-217ENST00000599538 PIGTQ969N2 578 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 OR2H1Q9GZK4 316 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 SCPEP1Q9HB40 452 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 ASCL3Q9NQ33 180 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 FBLN5Q9UBX5 448 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 KCNK7Q9Y2U2 307 aa12.63□□□□□ -0.39
VRK3-217ENST00000599538 CDC14BO60729 498 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 PRAF2O60831 178 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 RLN1P04808 185 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 ZNF735P0CB33 412 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 PRF1P14222 555 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 MECP2P51608 486 aaKnown RBP12.62□□□□□ -0.39
VRK3-217ENST00000599538 TAS2R19P59542 299 aa12.62□□□□□ -0.39
VRK3-217ENST00000599538 UBE2MP61081 183 aaKnown RBP12.62□□□□□ -0.39
VRK3-217ENST00000599538 ECH1Q13011 328 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms