RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 KLHDC2Q9Y2U9 406 aa10.5□□□□□ -0.73
UPF1-203ENST00000594504 PCDHGB1Q9Y5G3 927 aa10.5□□□□□ -0.73
UPF1-203ENST00000594504 GMPPBQ9Y5P6 360 aa10.5□□□□□ -0.73
UPF1-203ENST00000594504 SOX21Q9Y651 276 aaPredicted RBP10.5□□□□□ -0.73
UPF1-203ENST00000594504 ANK2Q01484 3957 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 FOXH1O75593 365 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 ZNF205O95201 554 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 SELEP16581 610 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 GATA3P23771 443 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 FPR2P25090 351 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 PEX2P28328 305 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 CX3CR1P49238 355 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 ZNF154Q13106 437 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 HLXQ14774 488 aaPredicted RBP10.49□□□□□ -0.73
UPF1-203ENST00000594504 LRRC36Q1X8D7 754 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
UPF1-203ENST00000594504 LPCAT4Q643R3 524 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 KCTD18Q6PI47 426 aaPredicted RBP10.49□□□□□ -0.73
UPF1-203ENST00000594504 DEGS2Q6QHC5 323 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 LRRC28Q86X40 367 aaPredicted RBP10.49□□□□□ -0.73
UPF1-203ENST00000594504 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.49□□□□□ -0.73
UPF1-203ENST00000594504 DIRC2Q96SL1 478 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 ADGRL4Q9HBW9 690 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 FAM118AQ9NWS6 357 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 DNAJC27Q9NZQ0 273 aa10.49□□□□□ -0.73
UPF1-203ENST00000594504 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 IGHV3-64DA0A0J9YX35 117 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 LOC100130705A0A1B0GUX0 176 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 H0YL77 283 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 PHYHO14832 338 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 SLC16A6O15403 523 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 MPZL2O60487 215 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 HCCSP53701 268 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 ROM1Q03395 351 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 GK2Q14410 553 aaPredicted RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 ZMYND11Q15326 602 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 OCLNQ16625 522 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 SNAI3Q3KNW1 292 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 OGFRL1Q5TC84 451 aaPredicted RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 MEDAGQ5VYS4 303 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 LRRN1Q6UXK5 716 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 PGAP1Q75T13 922 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 MRPL21Q7Z2W9 205 aaKnown RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 KRT77Q7Z794 578 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 SLC35F2Q8IXU6 374 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 GALNT4Q8N4A0 578 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 ZNF555Q8NEP9 628 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 SGMS2Q8NHU3 365 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 ZNF420Q8TAQ5 688 aaPredicted RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 UBE2FQ969M7 185 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 ZNF48Q96MX3 618 aaPredicted RBP10.48□□□□□ -0.73
UPF1-203ENST00000594504 SIGLEC11Q96RL6 698 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 OPA3Q9H6K4 179 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 CLN6Q9NWW5 311 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.48□□□□□ -0.73
UPF1-203ENST00000594504 COPS3Q9UNS2 423 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 AUP1Q9Y679 476 aa10.48□□□□□ -0.73
UPF1-203ENST00000594504 WNK2Q9Y3S1 2297 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 SNTNA6NMZ2 147 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 DLGAP1O14490 977 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 KCNAB3O43448 404 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 XRCC2O43543 280 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ENTPD6O75354 484 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ZNF254O75437 659 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ANXA2P07355 339 aaKnown RBP10.47□□□□□ -0.73
UPF1-203ENST00000594504 SLC2A1P11166 492 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ZNF12P17014 697 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ZNF121P58317 390 aaPredicted RBP10.47□□□□□ -0.73
UPF1-203ENST00000594504 BTG1P62324 171 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ARMCX4Q5H9R4 360 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 GLYATL3Q5SZD4 288 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 OR2T2Q6IF00 324 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 PRSS45Q7RTY3 260 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ENTHD1Q8IYW4 607 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 ZNF679Q8IYX0 411 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 KLHL36Q8N4N3 616 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 OR52H1Q8NGJ2 320 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 C1orf147Q96MC9 270 aaPredicted RBP10.47□□□□□ -0.73
UPF1-203ENST00000594504 OR2V2Q96R30 315 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 OR8B4Q96RC9 309 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 MROQ9BYG7 248 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 IL19Q9UHD0 177 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 PPP1R3CQ9UQK1 317 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 LRP12Q9Y561 859 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 N6AMT1Q9Y5N5 214 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 INSIG2Q9Y5U4 225 aa10.47□□□□□ -0.73
UPF1-203ENST00000594504 PPIAL4EA0A075B759 164 aa10.46□□□□□ -0.73
UPF1-203ENST00000594504 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.73
UPF1-203ENST00000594504 C5orf63A6NC05 138 aa10.46□□□□□ -0.73
UPF1-203ENST00000594504 F5H0A9 414 aaPredicted RBP10.46□□□□□ -0.73
UPF1-203ENST00000594504 PPIAL4DF5H284 164 aa10.46□□□□□ -0.73
UPF1-203ENST00000594504 TMEM178BH3BS89 294 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms