RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NMNAT2Q9BZQ4 307 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 SIRPDQ9H106 197 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 ARMC1Q9NVT9 282 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 C1RLQ9NZP8 487 aa16.94■□□□□ 0.3
TRIM47-207ENST00000593089 A0A1B0GUS0 222 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 DHRS12A0PJE2 317 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 CX3CR1P49238 355 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 ARF6P62330 175 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 RELBQ01201 579 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 EIF2B1Q14232 305 aaKnown RBP16.93■□□□□ 0.3
TRIM47-207ENST00000593089 PDCD1Q15116 288 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 TIGD6Q17RP2 521 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 TEX30Q5JUR7 227 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 SLC16A9Q7RTY1 509 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 TMEM86BQ8N661 226 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 WFDC12Q8WWY7 111 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 ST8SIA4Q92187 359 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 SPSB4Q96A44 273 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 ACOXLQ9NUZ1 547 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 NDE1Q9NXR1 346 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 BAIAP2Q9UQB8 552 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 U3KQV3 271 aa16.93■□□□□ 0.3
TRIM47-207ENST00000593089 IGHV1-69DA0A0B4J2H0 117 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 A0A1B0GW55 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 LHBP01229 141 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 IGHV1-69P01742 117 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L2P0CJ85 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L3P0CJ86 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L4P0CJ87 422 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L5P0CJ88 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L6P0CJ89 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L7P0CJ90 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 HSD11B1P28845 292 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DDOSTP39656 456 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 MAGEA2P43356 314 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 SLC15A1P46059 708 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 SLC25A1P53007 311 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 GRB2P62993 217 aaKnown RBP16.92■□□□□ 0.3
TRIM47-207ENST00000593089 ELF3P78545 371 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-207ENST00000593089 FAM3AP98173 230 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DEFA6Q01524 100 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 SPATS1Q496A3 300 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 TEX36Q5VZQ5 186 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4L9Q6RFH8 374 aaPredicted RBP16.92■□□□□ 0.3
TRIM47-207ENST00000593089 WDR86Q86TI4 376 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 PDZD9Q8IXQ8 264 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 FGFRL1Q8N441 504 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 SCCPDHQ8NBX0 429 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 OR2T33Q8NG76 320 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 LRRC29Q8WV35 223 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 SGK3Q96BR1 496 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 REEP6Q96HR9 211 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 VNN3Q9NY84 501 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 ACTR3BQ9P1U1 418 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 DUX4Q9UBX2 424 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 POMT1Q9Y6A1 747 aa16.92■□□□□ 0.3
TRIM47-207ENST00000593089 IFNGP01579 166 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 GRK5P34947 590 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 GFOD2Q3B7J2 385 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 OLFML2AQ68BL7 652 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 FAM57BQ71RH2 274 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 DPY19L4Q7Z388 723 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 C11orf53Q8IXP5 236 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 SSMEM1Q8WWF3 244 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 CCL13Q99616 98 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 PPP1R3EQ9H7J1 279 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 DNAJC27Q9NZQ0 273 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 KAAG1Q9UBP8 84 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 ARL2BPQ9Y2Y0 163 aa16.91■□□□□ 0.3
TRIM47-207ENST00000593089 A0A0U1RQK1 487 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 TCRBV5S2A0A599 114 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 RIIAD1A6NNX1 92 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 NDUFA7O95182 113 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 ECDO95905 644 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-207ENST00000593089 CSNK2BP67870 215 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 MICBQ29980 383 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 MICAQ29983 383 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 LINC01590Q5TEZ4 76 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 ERI1Q8IV48 349 aaKnown RBP16.9■□□□□ 0.3
TRIM47-207ENST00000593089 OR1M1Q8NGA1 313 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 TBC1D15Q8TC07 691 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 OTULINQ96BN8 352 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 TOR3AQ9H497 397 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 REEP1Q9H902 201 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 MED20Q9H944 212 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 RNPEPL1Q9HAU8 725 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 PDP1Q9P0J1 537 aaPredicted RBP16.9■□□□□ 0.3
TRIM47-207ENST00000593089 RPUSD1Q9UJJ7 312 aaKnown RBP16.9■□□□□ 0.3
TRIM47-207ENST00000593089 SAMHD1Q9Y3Z3 626 aaKnown RBP16.9■□□□□ 0.3
TRIM47-207ENST00000593089 CMYA5Q8N3K9 4069 aa16.9■□□□□ 0.3
TRIM47-207ENST00000593089 hCG_38984A0A1B0GV85 526 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 CLPSL1A2RUU4 121 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 FAM183AA6NL82 134 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 DCTN3O75935 186 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 IGHV4-59P01825 116 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 ZNF3P17036 446 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 BLVRAP53004 296 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 WDR38Q5JTN6 314 aa16.89■□□□□ 0.29
TRIM47-207ENST00000593089 BRICD5Q6PL45 260 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms