RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SPACA5Q96QH8 159 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 SLC22A4Q9H015 551 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 C11orf54Q9H0W9 315 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-204ENST00000587339 PLSCR4Q9NRQ2 329 aa17.24■□□□□ 0.35
TRIM47-204ENST00000587339 CIB4A0PJX0 185 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 LANCL1O43813 399 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 TNFSF13O75888 250 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 LYZL6O75951 148 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ALDOBP05062 364 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 FAM87AP0C7U9 286 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 EDN3P14138 238 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 SPNP16150 400 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ACKR3P25106 362 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 MAP2K3P46734 347 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 PTH2RP49190 550 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ZNF92Q03936 586 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 RIPPLY1Q0D2K3 151 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 RTL6Q6ICC9 239 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ZNF584Q8IVC4 421 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 CISD2Q8N5K1 135 aaKnown RBP17.23■□□□□ 0.35
TRIM47-204ENST00000587339 C15orf40Q8WUR7 153 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 SNRNP27Q8WVK2 155 aaKnown RBP17.23■□□□□ 0.35
TRIM47-204ENST00000587339 AKAP1Q92667 903 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRIM47-204ENST00000587339 POM121L2Q96KW2 1035 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 DIABLOQ9NR28 239 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 XRCC3O43542 346 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 RFX2P48378 723 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 DGCR2P98153 550 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 UBE2V2Q15819 145 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 RNASE12Q5GAN4 147 aaKnown RBP17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ANGPTL5Q86XS5 388 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 SMIM4Q8WVI0 70 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 YIPF5Q969M3 257 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 TBCCD1Q9NVR7 557 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 ETAA1Q9NY74 926 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 FAM215AQ9Y5M1 114 aa17.23■□□□□ 0.35
TRIM47-204ENST00000587339 DOCK7Q96N67 2140 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 ALX3O95076 343 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 CD3GP09693 182 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-204ENST00000587339 APLNRP35414 380 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 TAS2R20P59543 309 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 UBE2NP61088 152 aaKnown RBP17.22■□□□□ 0.35
TRIM47-204ENST00000587339 DMRTC1Q5HYR2 192 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 C1orf185Q5T7R7 199 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 HACD4Q5VWC8 232 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 AWAT2Q6E213 333 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 MDP1Q86V88 176 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 CCDC36Q8IYA8 594 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 FAM57AQ8TBR7 257 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 MS4A3Q96HJ5 214 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 GPER1Q99527 375 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 ATG5Q9H1Y0 275 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 MYEF2Q9P2K5 600 aaKnown RBP17.22■□□□□ 0.35
TRIM47-204ENST00000587339 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 SVILO95425 2214 aa17.22■□□□□ 0.35
TRIM47-204ENST00000587339 hCG_38984A0A1B0GV85 526 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 LDLRAD4O15165 306 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 GSTZ1O43708 216 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-204ENST00000587339 PFDN1O60925 122 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 TPPPO94811 219 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 TOXO94900 526 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 MNDAP41218 407 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 ID4P47928 161 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 GSK3AP49840 483 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 PRSS12P56730 875 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 FAM3AP98173 230 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 TNK1Q13470 666 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 GABRA6Q16445 453 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 NPRL2Q8WTW4 380 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 SPSB4Q96A44 273 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 PTX4Q96A99 478 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 APOBEC3DQ96AK3 386 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-204ENST00000587339 STARD4Q96DR4 205 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 PTPRQQ9UMZ3 2332 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 GGT3PA6NGU5 568 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 LYRM1O43325 122 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 BPNT1O95861 308 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 IL2RAP01589 272 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 SERPINA5P05154 406 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 CRHP06850 196 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 PRF1P14222 555 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 COX5AP20674 150 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 RANBP1P43487 201 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 MRPS10P82664 201 aaKnown RBP17.21■□□□□ 0.35
TRIM47-204ENST00000587339 EIF2S3LQ2VIR3 472 aaKnown RBP17.21■□□□□ 0.35
TRIM47-204ENST00000587339 OR10K2Q6IF99 312 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 MZT2BQ6NZ67 158 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 MTFR2Q6P444 385 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 KRT74Q7RTS7 529 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 RNF144BQ7Z419 303 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 BIVMQ86UB2 503 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 SSC4DQ8WTU2 575 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 GCDHQ92947 438 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-204ENST00000587339 AUNIPQ9H7T9 357 aa17.21■□□□□ 0.35
TRIM47-204ENST00000587339 FUOMA2VDF0 154 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 GABARAPH6UMI1 98 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 KDM4BO94953 1096 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 TDGF1P3P51864 188 aa17.2■□□□□ 0.34
TRIM47-204ENST00000587339 OR8B8Q15620 311 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms