RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GBX2P52951 348 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-204ENST00000586558 SLC35A2P78381 396 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 MRPS11P82912 194 aaKnown RBP16.31■□□□□ 0.2
DDX39A-204ENST00000586558 Q5PR19 223 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 RNLSQ5VYX0 342 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 ZNF786Q8N393 782 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 CCDC54Q8NEL0 328 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 ELMOD3Q96FG2 381 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 LYZL4Q96KX0 146 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 DUSP21Q9H596 190 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 ISG20L2Q9H9L3 353 aaKnown RBP16.31■□□□□ 0.2
DDX39A-204ENST00000586558 SLC22A13Q9Y226 551 aa16.31■□□□□ 0.2
DDX39A-204ENST00000586558 ARID1AO14497 2285 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 CSMD1Q96PZ7 3565 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 DHRS7CA6NNS2 312 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 ANKRD30BLA7E2S9 258 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 PTGES3LE9PB15 166 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 LILRA1O75019 489 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 RPSAP08865 295 aaKnown RBP16.3■□□□□ 0.2
DDX39A-204ENST00000586558 CSF3P09919 207 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 CRHBPP24387 322 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 MAP2K3P46734 347 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 TGM4P49221 684 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 DSCR9P59020 149 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 MVKQ03426 396 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 CCDC58Q4VC31 144 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 WDR38Q5JTN6 314 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 PRSS35Q8N3Z0 413 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 PLPP7Q8NBV4 271 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 OR2Z1Q8NG97 314 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 CDCA4Q9BXL8 241 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 DECR2Q9NUI1 292 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 ITGB1BP2Q9UKP3 347 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 PCDHGB5Q9Y5G0 923 aa16.3■□□□□ 0.2
DDX39A-204ENST00000586558 A0A1B0GVI7 797 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 MYL12BO14950 172 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 SSX4O60224 188 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 GMDSO60547 372 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 DHRS3O75911 302 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 CCL1P22362 96 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 C21orf33P30042 268 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 MAGEB1P43366 347 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 KIR3DL2P43630 455 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 CCL8P80075 99 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 TNFAIP6P98066 277 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 ALKBH1Q13686 389 aaKnown RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 TESK1Q15569 626 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 TSTQ16762 297 aaKnown RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 ZBTB37Q5TC79 503 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 TMEM244Q5VVB8 128 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 Q6ZSR3 168 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 DOK3Q7L591 496 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 SPERTQ8NA61 448 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 PPP1R14AQ96A00 147 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 FAM71F1Q96KD3 344 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 SAP30LQ9HAJ7 183 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 ABCB9Q9NP78 766 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 PAK1IP1Q9NWT1 392 aaPredicted RBP16.29■□□□□ 0.2
DDX39A-204ENST00000586558 BABAM2Q9NXR7 383 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 UBAP1Q9NZ09 502 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 FRRS1LQ9P0K9 344 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 CLEC2DQ9UHP7 191 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 ERGIC3Q9Y282 383 aa16.29■□□□□ 0.2
DDX39A-204ENST00000586558 A0A1B0GTI1 187 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 P2RY10O00398 339 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 TPD52L2O43399 206 aaKnown RBP16.28■□□□□ 0.2
DDX39A-204ENST00000586558 NCR1O76036 304 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 HPXP02790 462 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 ISG15P05161 165 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 DAOP14920 347 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 ZNF12P17014 697 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 CA6P23280 308 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 ACKR3P25106 362 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 GNALP38405 381 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 NANOS3P60323 173 aaKnown RBP16.28■□□□□ 0.2
DDX39A-204ENST00000586558 TNK1Q13470 666 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 OR2G6Q5TZ20 316 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 CLEC2AQ6UVW9 174 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 KRT74Q7RTS7 529 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 KRTAP1-3Q8IUG1 177 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 CELF2-AS1Q8N7Q2 184 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 ZNF485Q8NCK3 441 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 SEMA6DQ8NFY4 1073 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 OR10AD1Q8NGE0 317 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 UBASH3BQ8TF42 649 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 RDH5Q92781 318 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 ADAT1Q9BUB4 502 aaKnown RBP16.28■□□□□ 0.2
DDX39A-204ENST00000586558 YTHDF1Q9BYJ9 559 aaKnown RBP16.28■□□□□ 0.2
DDX39A-204ENST00000586558 TRIM36Q9NQ86 728 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 OTOGQ6ZRI0 2925 aa16.28■□□□□ 0.2
DDX39A-204ENST00000586558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.27■□□□□ 0.2
DDX39A-204ENST00000586558 ZNF816-ZNF321PA0A0X1KG74 233 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 LOC107986453A0A1B0GWG9 222 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 TMEM212A6NML5 194 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 OR4C45A6NMZ5 311 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 MLNRO43193 412 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 SYT7O43581 403 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 RGS10O43665 173 aa16.27■□□□□ 0.2
DDX39A-204ENST00000586558 LY6HO94772 140 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms