RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	CMYA5	Q8N3K9	4069 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460		A0A1B0GW55	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	hCG_1807616	A0A1W2PRN6	198 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ARPC2	O15144	300 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	GPR137B	O60478	399 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SPARC	P09486	303 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L2	P0CJ85	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L3	P0CJ86	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L4	P0CJ87	422 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L5	P0CJ88	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L6	P0CJ89	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L7	P0CJ90	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	FMO3	P31513	532 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DDOST	P39656	456 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ENTPD1	P49961	510 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RPL15	P61313	204 aa	Known RBP	13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	FAM3A	P98173	230 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	MZT1	Q08AG7	82 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SAMD4B	Q5PRF9	694 aa	Known RBP	13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ASPHD2	Q6ICH7	369 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	BRICD5	Q6PL45	260 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LY6G5B	Q8NDX9	201 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR9Q2	Q8NGE9	314 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR52L1	Q8NGH7	329 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR4C15	Q8NGM1	316 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CCL13	Q99616	98 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	NMNAT2	Q9BZQ4	307 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	PPP1R3E	Q9H7J1	279 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RNPEPL1	Q9HAU8	725 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DUX4	Q9UBX2	424 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RNF114	Q9Y508	228 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LYVE1	Q9Y5Y7	322 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DOCK11	Q5JSL3	2073 aa		13.49	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ANKRD30BL	A7E2S9	258 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	TNFRSF11B	O00300	401 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	GYPB	P06028	91 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SLC25A1	P53007	311 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CRMP1	Q14194	572 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CDON	Q4KMG0	1287 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	HSP90B2P	Q58FF3	399 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RPL13AP3	Q6NVV1	102 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RASSF6	Q6ZTQ3	369 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SLC16A9	Q7RTY1	509 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LDLRAD3	Q86YD5	345 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	PGAM4	Q8N0Y7	254 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LRRC29	Q8WV35	223 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ST8SIA4	Q92187	359 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SEH1L	Q96EE3	360 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	TSSK6	Q9BXA6	273 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	KPTN	Q9Y664	436 aa		13.48	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	WNK1	Q9H4A3	2382 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DHRS12	A0PJE2	317 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460		M0QZ24	198 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	XRCC2	O43543	280 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CLPX	O76031	633 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CLU	P10909	449 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	MUC1	P15941	1255 aa	Predicted RBP	13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SPI1	P17947	270 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	AMY2B	P19961	511 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	GRK5	P34947	590 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	PROK1	P58294	105 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	MICB	Q29980	383 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	PRSS45	Q7RTY3	260 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	DPY19L4	Q7Z388	723 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	VMO1	Q7Z5L0	202 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LINC00471	Q8N535	108 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SCCPDH	Q8NBX0	429 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR1M1	Q8NGA1	313 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR4Q3	Q8NH05	313 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OR8S1	Q8NH09	359 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RBM4B	Q9BQ04	359 aa	Known RBP	13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	OPA3	Q9H6K4	179 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ZNF319	Q9P2F9	582 aa		13.47	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ZNF878	C9JN71	531 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	TIMM23	O14925	209 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	TBX1	O43435	398 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SNX3	O60493	162 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	SLC15A1	P46059	708 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	TGM4	P49221	684 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	CSNK2B	P67870	215 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	PPP1R8	Q12972	351 aa	Known RBP	13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	KLHL12	Q53G59	568 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	WDR38	Q5JTN6	314 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	LINC01590	Q5TEZ4	76 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	WDR82	Q6UXN9	313 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	REEP6	Q96HR9	211 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	MMP27	Q9H306	513 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	MED4	Q9NPJ6	270 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ARL8B	Q9NVJ2	186 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	FAM96B	Q9Y3D0	163 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	RHBDD3	Q9Y3P4	386 aa		13.46	□□□□□ -0.25
PRKAR1A-206	ENST00000585460	ACOT8	O14734	319 aa		13.45	□□□□□ -0.26
PRKAR1A-206	ENST00000585460	CDIPT	O14735	213 aa		13.45	□□□□□ -0.26
PRKAR1A-206	ENST00000585460	CCNB2	O95067	398 aa		13.45	□□□□□ -0.26
PRKAR1A-206	ENST00000585460	ANXA2	P07355	339 aa	Known RBP	13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms