RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ASPHD2Q6ICH7 369 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 METAP1DQ6UB28 335 aaPredicted RBP8.74□□□□□ -1.01
RFFL-209ENST00000581265 ZDHHC21Q8IVQ6 265 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 LINC00471Q8N535 108 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 ZSCAN4Q8NAM6 433 aaPredicted RBP8.74□□□□□ -1.01
RFFL-209ENST00000581265 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 OR52L1Q8NGH7 329 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 OR56B2PQ8NGI1 322 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 OR51L1Q8NGJ5 315 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 NPRL2Q8WTW4 380 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 SLAMF6Q96DU3 332 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 RBM4BQ9BQ04 359 aaKnown RBP8.74□□□□□ -1.01
RFFL-209ENST00000581265 COPS4Q9BT78 406 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 DPAGT1Q9H3H5 408 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 EGLN3Q9H6Z9 239 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 ZNF446Q9NWS9 450 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 CDH10Q9Y6N8 788 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 COMMD3-BMI1R4GMX3 469 aa8.74□□□□□ -1.01
RFFL-209ENST00000581265 A0A1B0GVI7 797 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 hCG_1807616A0A1W2PRN6 198 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 ANKRD30BLA7E2S9 258 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 ZNF593O00488 134 aaPredicted RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 GPR37O15354 613 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 XRCC2O43543 280 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SLC2A1P11166 492 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 FMO3P31513 532 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 MSX2P35548 267 aaPredicted RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 SLC15A1P46059 708 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 ENTPD1P49961 510 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 FAM3AP98173 230 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 POU4F2Q12837 409 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 TAF13Q15543 124 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 TAF9Q16594 264 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 MICBQ29980 383 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SAMD4BQ5PRF9 694 aaKnown RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 ATPAF1Q5TC12 328 aaPredicted RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 ZNF770Q6IQ21 691 aaPredicted RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 LYPD4Q6UWN0 246 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 GDPGP1Q6ZNW5 385 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 RASSF6Q6ZTQ3 369 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SLC16A9Q7RTY1 509 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 WDR86Q86TI4 376 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 LNX2Q8N448 690 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 ZNF511Q8NB15 262 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SCCPDHQ8NBX0 429 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SLC37A3Q8NCC5 494 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 OR8S1Q8NH09 359 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 SGK3Q96BR1 496 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 NSMCE2Q96MF7 247 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 ELAC2Q9BQ52 826 aaKnown RBP8.73□□□□□ -1.01
RFFL-209ENST00000581265 NMNAT2Q9BZQ4 307 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 CENPMQ9NSP4 180 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 FAM96BQ9Y3D0 163 aa8.73□□□□□ -1.01
RFFL-209ENST00000581265 IGHV3OR15-7A0A075B7D8 119 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 ZNF878C9JN71 531 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.72□□□□□ -1.01
RFFL-209ENST00000581265 ARPC2O15144 300 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 PIN1P1O15428 100 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 TIPRLO75663 272 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 GASTP01350 101 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 SPARCP09486 303 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 TGM4P49221 684 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 BLVRAP53004 296 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 SLC25A1P53007 311 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 SPATS1Q496A3 300 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 HSP90B2PQ58FF3 399 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 WDR82Q6UXN9 313 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 PRSS45Q7RTY3 260 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 VMO1Q7Z5L0 202 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 PGAM4Q8N0Y7 254 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 OR1M1Q8NGA1 313 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 OR52H1Q8NGJ2 320 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 OR8D4Q8NGM9 314 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 OR9Q1Q8NGQ5 310 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 LRRC29Q8WV35 223 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 LRTOMTQ8WZ04 291 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 ST8SIA4Q92187 359 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 C12orf43Q96C57 262 aaKnown RBP8.72□□□□□ -1.01
RFFL-209ENST00000581265 CDRT15Q96T59 188 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 CCL13Q99616 98 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 BTBD10Q9BSF8 475 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 TLNRD1Q9H1K6 362 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 TOR3AQ9H497 397 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 C16orf95Q9H693 158 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 SP140LQ9H930 580 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 BAIAP2Q9UQB8 552 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 CAB39Q9Y376 341 aaPredicted RBP8.72□□□□□ -1.01
RFFL-209ENST00000581265 N6AMT1Q9Y5N5 214 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 LYVE1Q9Y5Y7 322 aa8.72□□□□□ -1.01
RFFL-209ENST00000581265 DHRS12A0PJE2 317 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 SLC22A31A6NKX4 558 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 TNFRSF11BO00300 401 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 TSPAN9O75954 239 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 APOC1P02654 83 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 FBP1P09467 338 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 SPI1P17947 270 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 AMY2BP19961 511 aa8.71□□□□□ -1.02
RFFL-209ENST00000581265 CFL1P23528 166 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms