RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PPIAL4AQ9Y536 164 aa12.45□□□□□ -0.42
SS18-212ENST00000579061 SLC22A31A6NKX4 558 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 RNF212BA8MTL3 300 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 ZNF254O75437 659 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 AVPP01185 164 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 ZFP36P26651 326 aaKnown RBP12.44□□□□□ -0.42
SS18-212ENST00000579061 EPHA2P29317 976 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 RBMXP38159 391 aaKnown RBP12.44□□□□□ -0.42
SS18-212ENST00000579061 GSK3AP49840 483 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 ROM1Q03395 351 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 OR8B8Q15620 311 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 MPPED2Q15777 294 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 AADACL4Q5VUY2 407 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 PRAMEF6Q5VXH4 476 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 LIPNQ5VXI9 398 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 C1orf229Q6ZS94 237 aaPredicted RBP12.44□□□□□ -0.42
SS18-212ENST00000579061 MEPCEQ7L2J0 689 aaKnown RBP12.44□□□□□ -0.42
SS18-212ENST00000579061 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 TCEANCQ8N8B7 351 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 ASB17Q8WXJ9 295 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 MNTQ99583 582 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 CIB1Q99828 191 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 TMEM246Q9BRR3 403 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 SEMA6AQ9H2E6 1030 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 METTL17Q9H7H0 456 aaPredicted RBP12.44□□□□□ -0.42
SS18-212ENST00000579061 UFSP2Q9NUQ7 469 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 HAO2Q9NYQ3 351 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 OAZ3Q9UMX2 235 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
SS18-212ENST00000579061 A0A0A6YYJ9 748 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 IGHV3-64DA0A0J9YX35 117 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 TCF21O43680 179 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 RPS2P15880 293 aaKnown RBP12.43□□□□□ -0.42
SS18-212ENST00000579061 DCDC5Q6ZRR9 648 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 ZNF771Q7L3S4 317 aaPredicted RBP12.43□□□□□ -0.42
SS18-212ENST00000579061 GID4Q8IVV7 300 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 ZNF679Q8IYX0 411 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 FTMTQ8N4E7 242 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 PYDC1Q8WXC3 89 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 NEIL1Q96FI4 390 aaPredicted RBP12.43□□□□□ -0.42
SS18-212ENST00000579061 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
SS18-212ENST00000579061 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
SS18-212ENST00000579061 GABARAPL3Q9BY60 117 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 MROQ9BYG7 248 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 ABCB9Q9NP78 766 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 BRD7Q9NPI1 651 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 TRIM36Q9NQ86 728 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 DNHD1Q96M86 4753 aa12.43□□□□□ -0.42
SS18-212ENST00000579061 A0A0U1RQV5 110 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 EBAG9O00559 213 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 PHYHO14832 338 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 MRPL3P09001 348 aaKnown RBP12.42□□□□□ -0.42
SS18-212ENST00000579061 ZNF12P17014 697 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 HCCSP53701 268 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 SEC61A1P61619 476 aaKnown RBP12.42□□□□□ -0.42
SS18-212ENST00000579061 KCNJ8Q15842 424 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 NLRC3Q7RTR2 1065 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 OR8S1Q8NH09 359 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 NANPQ8TBE9 248 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 OR8B4Q96RC9 309 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
SS18-212ENST00000579061 INSIG2Q9Y5U4 225 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 MPC1Q9Y5U8 109 aa12.42□□□□□ -0.42
SS18-212ENST00000579061 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 TMEM269A0A1B0GVZ9 245 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 TRAPPC2LH3BP13 241 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 LGALS8O00214 317 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 NDUFA2O43678 99 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 ZNF205O95201 554 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 FSHBP01225 129 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 ATP6V1B1P15313 513 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 GNALP38405 381 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 RIDAP52758 137 aaKnown RBP12.41□□□□□ -0.42
SS18-212ENST00000579061 IL5RAQ01344 420 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 ZNF154Q13106 437 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 KPNB1Q14974 876 aaKnown RBP12.41□□□□□ -0.42
SS18-212ENST00000579061 GFOD2Q3B7J2 385 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 ZNF829Q3KNS6 432 aaPredicted RBP12.41□□□□□ -0.42
SS18-212ENST00000579061 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 KRT74Q7RTS7 529 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 BCDIN3DQ7Z5W3 292 aaKnown RBP12.41□□□□□ -0.42
SS18-212ENST00000579061 PHC2Q8IXK0 858 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 OR8B3Q8NGG8 313 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 OR8J1Q8NGP2 316 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 DVL3Q92997 716 aaPredicted RBP12.41□□□□□ -0.42
SS18-212ENST00000579061 OR8B2Q96RD0 313 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 IL4I1Q96RQ9 567 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 RNPEPL1Q9HAU8 725 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 ADGRL4Q9HBW9 690 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 FAM206AQ9NX38 181 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 OR5V1Q9UGF6 321 aa12.41□□□□□ -0.42
SS18-212ENST00000579061 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms