RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 C9orf135Q5VTT2 229 aa17.77■□□□□ 0.43
SMG8-203ENST00000578922 DEGS2Q6QHC5 323 aa17.77■□□□□ 0.43
SMG8-203ENST00000578922 FOXL2NBQ6ZUU3 175 aa17.77■□□□□ 0.43
SMG8-203ENST00000578922 TMPRSS13Q9BYE2 586 aa17.77■□□□□ 0.43
SMG8-203ENST00000578922 PNRC2Q9NPJ4 139 aaKnown RBP17.77■□□□□ 0.43
SMG8-203ENST00000578922 STEAP1Q9UHE8 339 aa17.77■□□□□ 0.43
SMG8-203ENST00000578922 FREM1Q5H8C1 2179 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 M0R233 179 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 OR2A4O95047 310 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 RAD52P43351 418 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 TSPAN5P62079 268 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 LINC00303Q3SY05 128 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 ZNF626Q68DY1 528 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 TMEM106AQ96A25 262 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 TMEM45BQ96B21 275 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 OR2A7Q96R45 310 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 GPR35Q9HC97 309 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 MGAT4CQ9UBM8 478 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 SLC5A6Q9Y289 635 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 IGHG3P01860 377 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 SSTR2P30874 369 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 IGFL3Q6UXB1 125 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 IDO2Q6ZQW0 420 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 FBXO17Q96EF6 278 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 SLCO5A1Q9H2Y9 848 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 SLC7A10Q9NS82 523 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 FAM206AQ9NX38 181 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 NUP50Q9UKX7 468 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 ATMQ13315 3056 aa17.76■□□□□ 0.43
SMG8-203ENST00000578922 CACNA1GO43497 2377 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 SLC22A20A6NK97 555 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 H7C417 338 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 RBBP9O75884 186 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 PATE4P0C8F1 98 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 MRPS34P82930 218 aaKnown RBP17.75■□□□□ 0.43
SMG8-203ENST00000578922 OR5M9Q8NGP3 310 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 CPT1CQ8TCG5 803 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 MTFP1Q9UDX5 166 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 RTTNQ86VV8 2226 aa17.75■□□□□ 0.43
SMG8-203ENST00000578922 P2RY10O00398 339 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 DCTDP32321 178 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 ANKRD16Q6P6B7 361 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 NUFIP2Q7Z417 695 aaKnown RBP17.74■□□□□ 0.43
SMG8-203ENST00000578922 DNAAF1Q8NEP3 725 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 FOXB1Q99853 325 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 GSX2Q9BZM3 304 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 C12orf49Q9H741 205 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 TMEM38BQ9NVV0 291 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 PIPOXQ9P0Z9 390 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 SVILO95425 2214 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 PLSCR5A0PG75 271 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 TTLL8A6PVC2 850 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 CSF1P09603 554 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 ANOS1P23352 680 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 PSMA6P60900 246 aaKnown RBP17.74■□□□□ 0.43
SMG8-203ENST00000578922 RNPS1Q15287 305 aaKnown RBP17.74■□□□□ 0.43
SMG8-203ENST00000578922 GJC3Q8NFK1 279 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 SEC22CQ9BRL7 303 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 PBOV1Q9GZY1 135 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 BCO1Q9HAY6 547 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 PARPBPQ9NWS1 579 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 ZNF69Q9UC07 566 aa17.74■□□□□ 0.43
SMG8-203ENST00000578922 TRAV8-7A0A075B6U6 113 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 B8ZZF3 427 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 MAS1P04201 325 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 MMP16P51512 607 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 OPCMLQ14982 345 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 RBMS2Q15434 407 aaKnown RBP17.73■□□□□ 0.43
SMG8-203ENST00000578922 FAM27BQ5VT28 67 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 COMMD7Q86VX2 200 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 RBMXL3Q8N7X1 1067 aaKnown RBP17.73■□□□□ 0.43
SMG8-203ENST00000578922 SLC17A5Q9NRA2 495 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 KIF25Q9UIL4 384 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 DHDHQ9UQ10 334 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 SSUH2Q9Y2M2 353 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 IGF2RP11717 2491 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 LOC107986453A0A1B0GWG9 222 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 MKRN2OSH3BPM6 223 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 LMX1BO60663 402 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 TOXO94900 526 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 RRASP10301 218 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 CX3CR1P49238 355 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 SSBP1Q04837 148 aaKnown RBP17.73■□□□□ 0.43
SMG8-203ENST00000578922 RIPPLY2Q5TAB7 128 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 ZNF283Q8N7M2 679 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 PLEK2Q9NYT0 353 aa17.73■□□□□ 0.43
SMG8-203ENST00000578922 ZSCAN5BA6NJL1 495 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 ZNF724A8MTY0 619 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 F5H5K5 113 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 FOXG1P55316 489 aaPredicted RBP17.72■□□□□ 0.43
SMG8-203ENST00000578922 ZNF121P58317 390 aaPredicted RBP17.72■□□□□ 0.43
SMG8-203ENST00000578922 Q6ZS92 163 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 P4HA3Q7Z4N8 544 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 EXTL1Q92935 676 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 APH1AQ96BI3 265 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 ABHD17AQ96GS6 310 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 TRIB1Q96RU8 372 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 PIEZO2Q9H5I5 2752 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 UBE2QL1A1L167 161 aa17.72■□□□□ 0.43
SMG8-203ENST00000578922 GGT3PA6NGU5 568 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms