RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 OR10H4Q8NGA5 316 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 OR4M2Q8NGB6 313 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 OR51G2Q8NGK0 314 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 OR8J1Q8NGP2 316 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 TRUB1Q8WWH5 349 aaKnown RBP5.53□□□□□ -1.52
TRAF4-213ENST00000578917 ERGIC1Q969X5 290 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 MNTQ99583 582 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 TBX5Q99593 518 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 APOL4Q9BPW4 351 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 MICU1Q9BPX6 476 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 C9orf16Q9BUW7 83 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 PAPOLGQ9BWT3 736 aaKnown RBP5.53□□□□□ -1.52
TRAF4-213ENST00000578917 TTTY10Q9BZA0 68 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 OCEL1Q9H607 264 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 S100A14Q9HCY8 104 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 C1orf123Q9NWV4 160 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 TMEM160Q9NX00 188 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 RNF7Q9UBF6 113 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 WARS2Q9UGM6 360 aaKnown RBP5.53□□□□□ -1.52
TRAF4-213ENST00000578917 KLHDC2Q9Y2U9 406 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 PPIAL4AQ9Y536 164 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 LRP12Q9Y561 859 aa5.53□□□□□ -1.52
TRAF4-213ENST00000578917 ACOD1A6NK06 481 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF850A8MQ14 1090 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 LOC110117498-PIK3R3F6TDL0 507 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 H3BNX3 289 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 EI24O14681 340 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MLNRO43193 412 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MTRF1O75570 445 aaKnown RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 FOXH1O75593 365 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 RPP14O95059 124 aaKnown RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 APOL3O95236 402 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 IGHV2-5P01817 119 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ALPLP05186 524 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 RPS2P15880 293 aaKnown RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 RBMXP38159 391 aaKnown RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MAP2K3P46734 347 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MMP16P51512 607 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 FAM3AP98173 230 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 IL5RAQ01344 420 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 HNRNPA0Q13151 305 aaKnown RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MAB21L1Q13394 359 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MPPED2Q15777 294 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 TMEM155Q4W5P6 130 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 BCL2L15Q5TBC7 163 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 AADACL4Q5VUY2 407 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 PRAMEF6Q5VXH4 476 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 C12orf73Q69YU5 71 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 SFRP4Q6FHJ7 346 aaPredicted RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF679Q8IYX0 411 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 PLPP7Q8NBV4 271 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 PIGCQ92535 297 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 DVL3Q92997 716 aaPredicted RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 SPSB4Q96A44 273 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 C1orf159Q96HA4 380 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 FAM71F1Q96KD3 344 aaPredicted RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 Q96MT0 163 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ADI1Q9BV57 179 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 RTL8AQ9BWD3 113 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 GABARAPL3Q9BY60 117 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 PBOV1Q9GZY1 135 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 C7orf69Q9H7B7 122 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 CLN6Q9NWW5 311 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 DCAF16Q9NXF7 216 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 MIOXQ9UGB7 285 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 OR5V1Q9UGF6 321 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 METRNQ9UJH8 293 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 ZNF391Q9UJN7 358 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRAF4-213ENST00000578917 RHBDD3Q9Y3P4 386 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 GMPPBQ9Y5P6 360 aa5.52□□□□□ -1.53
TRAF4-213ENST00000578917 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.52□□□□□ -1.531e-26■■■■■ 26.8
TRAF4-213ENST00000578917 TRAV38-1A0A0B4J264 116 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 A0A1W2PQL4 384 aaPredicted RBP5.51□□□□□ -1.53
TRAF4-213ENST00000578917 DAPL1A0PJW8 107 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 CCDC182A6NF36 153 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 METTL15A6NJ78 407 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 KIAA1324LA8MWY0 1029 aaPredicted RBP5.51□□□□□ -1.53
TRAF4-213ENST00000578917 C3orf80F5H4A9 247 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 J3QLI3 93 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 MAGEB4O15481 346 aaPredicted RBP5.51□□□□□ -1.53
TRAF4-213ENST00000578917 PHF1O43189 567 aaPredicted RBP5.51□□□□□ -1.53
TRAF4-213ENST00000578917 FAM20BO75063 409 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 ENTPD6O75354 484 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 PNPP00491 289 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 IGHV2-70P01814 119 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 OR2T7P0C7T2 308 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 GATA3P23771 443 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 HTR1FP30939 366 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 DCTDP32321 178 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 CD200P41217 278 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 GATA4P43694 442 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 MTNR1AP48039 350 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 PSMA6P60900 246 aaKnown RBP5.51□□□□□ -1.53
TRAF4-213ENST00000578917 GMFBP60983 142 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 GNB2P62879 340 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 EFNB1P98172 346 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 ROM1Q03395 351 aa5.51□□□□□ -1.53
TRAF4-213ENST00000578917 RIPPLY1Q0D2K3 151 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms