RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 CBX1P83916 185 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 TMEM236Q5W0B7 351 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 DOK3Q7L591 496 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 GCSAMQ8N6F7 178 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 TAF15Q92804 592 aaKnown RBP eCLIP11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 UPRTQ96BW1 309 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 PLEKHA8Q96JA3 519 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 NUDT16L1Q9BRJ7 211 aaKnown RBP11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 NTN4Q9HB63 628 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
CUEDC1-204ENST00000577497 IGHV3OR15-7A0A075B7D8 119 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 KIR2DS1A0A191URI9 304 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 TCRBV3S1A0A5B6 114 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 A6NLC8 198 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 PRR23D1E9PI22 279 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 LGALS8O00214 317 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 PHYHO14832 338 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 TNFRSF13BO14836 293 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 GYG2O15488 501 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 PLATP00750 562 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 PRR23D2P0DMB1 279 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 OSMP13725 252 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 CPT2P23786 658 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 NAA10P41227 235 aaPredicted RBP11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 CSNK2BP67870 215 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 CDK5Q00535 292 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 POU4F2Q12837 409 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 OR8B8Q15620 311 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 DNAL1Q4LDG9 190 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 FAM90A1Q86YD7 464 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 CPOQ8IVL8 374 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 C11orf53Q8IXP5 236 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 BCAS4Q8TDM0 211 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 TECTBQ96PL2 329 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 TOR3AQ9H497 397 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 POMPQ9Y244 141 aa11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 NOP16Q9Y3C1 178 aaKnown RBP11.29□□□□□ -0.6
CUEDC1-204ENST00000577497 A0A1B0GW55 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 ANKRD30BLA7E2S9 258 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 GYPAP02724 150 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 LYNP07948 512 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 SLC2A5P22732 501 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 GSK3AP49840 483 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 HCCSP53701 268 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 FGF12P61328 243 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4L9Q6RFH8 374 aaPredicted RBP11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 BRD3OSQ6XYD6 125 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 SHFQ7M4L6 423 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 PAPD5Q8NDF8 572 aaKnown RBP11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 SEH1LQ96EE3 360 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 MS4A7Q9GZW8 240 aaPredicted RBP11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 DUX4Q9UBX2 424 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 RHBDD3Q9Y3P4 386 aa11.28□□□□□ -0.6
CUEDC1-204ENST00000577497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 PRODHO43272 600 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 ADAM20O43506 726 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 TIPRLO75663 272 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 DNAJC8O75937 253 aaPredicted RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 LHBP01229 141 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 SFTPBP07988 381 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 H2BFMP0C1H6 154 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 PRTN3P24158 256 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 ACKR3P25106 362 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 DDOSTP39656 456 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 BAMBIQ13145 260 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 AWAT1Q58HT5 328 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 C9orf139Q6ZV77 190 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 SPERTQ8NA61 448 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 OR1M1Q8NGA1 313 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 OR8S1Q8NH09 359 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 PGAM5Q96HS1 289 aa11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 PAPOLGQ9BWT3 736 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 CADM1Q9BY67 442 aaKnown RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 FGF23Q9GZV9 251 aaPredicted RBP11.27□□□□□ -0.61
CUEDC1-204ENST00000577497 ZNF556Q9HAH1 456 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms