RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ZNF684Q5T5D7 378 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 AAED1Q7RTV5 226 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SFT2D1Q8WV19 159 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 C11orf40Q8WZ69 217 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 FRZBQ92765 325 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 PBX4Q9BYU1 374 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 FAM60AQ9NP50 221 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 GDF2Q9UK05 429 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 UNC13CQ8NB66 2214 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SCN2AQ99250 2005 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 HSPB6O14558 160 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 RAC2P15153 192 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 NANOS3P60323 173 aaKnown RBP9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 NANPQ8TBE9 248 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 PGLYRP3Q96LB9 341 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 PLEKHA2Q9HB19 425 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 MMP17Q9ULZ9 603 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 FLVCR1Q9Y5Y0 555 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SVILO95425 2214 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 GPR31O00270 319 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 PPP1R2P9O14990 202 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SEMA7AO75326 666 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 OR5H8P0DN80 308 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 EIF2S3LQ2VIR3 472 aaKnown RBP9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 TMEM182Q6ZP80 229 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 ARHGEF39Q8N4T4 335 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 GVQW1Q8N7I0 195 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 STT3BQ8TCJ2 826 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SLC25A43Q8WUT9 341 aaPredicted RBP9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 PSMF1Q92530 271 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 GPR173Q9NS66 373 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 SH3BGRL2Q9UJC5 107 aa9.99□□□□□ -0.81
PCDHGA4-201ENST00000571252 RNASEK-C17orf49H0YIS7 233 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 EIF1BO60739 113 aaKnown RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ALOX12BO75342 701 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 EML2O95834 649 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ERGP11308 486 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 PPP1CAP62136 330 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 NKAIN1Q4KMZ8 207 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ATPAF1Q5TC12 328 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 C9orf135Q5VTT2 229 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 TMEM65Q6PI78 240 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CNEP1R1Q8N9A8 125 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 SGK3Q96BR1 496 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 MVB12AQ96EY5 273 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 FER1L6-AS2Q96M78 137 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 OR6C1Q96RD1 312 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 OR2C1O95371 312 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 NKX2-1P43699 371 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 IL34Q6ZMJ4 242 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 MALSU1Q96EH3 234 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 TMPRSS13Q9BYE2 586 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CHST6Q9GZX3 395 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 BCO1Q9HAY6 547 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ICAM5Q9UMF0 924 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 TO15178 435 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 RRP8O43159 456 aaKnown RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 DUS4LO95620 317 aaKnown RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 IFNA10P01566 189 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 IFNA4P05014 189 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 GUSBP08236 651 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 H2AFB1P0C5Y9 115 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 MSR1P21757 451 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 DUSP1P28562 367 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ZNF121P58317 390 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ISXQ2M1V0 245 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 SEMA6DQ8NFY4 1073 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ANKRD9Q96BM1 317 aaPredicted RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 OR51B6Q9H340 312 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 IFT22Q9H7X7 185 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 GPR160Q9UJ42 338 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 FRMPD3Q5JV73 1810 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 LAMA3Q16787 3333 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 E5RGE8 158 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CYR61O00622 381 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 XRCC2O43543 280 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 TPPPO94811 219 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 FOLR1P15328 257 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 APLNRP35414 380 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 IKZF1Q13422 519 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 SMAD4Q13485 552 aaKnown RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CD226Q15762 336 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ETFDHQ16134 617 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 C1QL3Q5VWW1 255 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 RPUSD3Q6P087 351 aaKnown RBP9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 ZNF561Q8N587 486 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 NSG2Q9Y328 171 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 FAM96BQ9Y3D0 163 aa9.98□□□□□ -0.81
PCDHGA4-201ENST00000571252 PLSCR5A0PG75 271 aa9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 TMEM218A2RU14 115 aa9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 FAM221AA4D161 298 aa9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 OR6C76A6NM76 312 aa9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 PEBP1P30086 187 aaKnown RBP9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 SRSF5Q13243 272 aaKnown RBP9.97□□□□□ -0.81
PCDHGA4-201ENST00000571252 MESTQ5EB52 335 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms