RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DNAL1Q4LDG9 190 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 TRPM8Q7Z2W7 1104 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 DPY19L4Q7Z388 723 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 SIGLECL1Q8N7X8 197 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 BOLLQ8N9W6 283 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 SPERTQ8NA61 448 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 CANT1Q8WVQ1 401 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 TOR3AQ9H497 397 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 YY1AP1Q9H869 796 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 SP140LQ9H930 580 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZNF556Q9HAH1 456 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 PDP1Q9P0J1 537 aaPredicted RBP10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 RNF7Q9UBF6 113 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 DYSFO75923 2080 aa10.33□□□□□ -0.76
CTDNEP1-205ENST00000570828 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 GLCEO94923 617 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 PTBP3O95758 552 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 PPIAL4GP0DN37 164 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 CD80P33681 288 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 DDOSTP39656 456 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 UBA52P62987 128 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 PAX8Q06710 450 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 FLOT2Q14254 428 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 OR8B8Q15620 311 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 GFOD2Q3B7J2 385 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 KLF17Q5JT82 389 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 SHFQ7M4L6 423 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 SPATA24Q86W54 205 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 PARP8Q8N3A8 854 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZDHHC22Q8N966 263 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 C19orf18Q8NEA5 215 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 OR8S1Q8NH09 359 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 RAB40AQ8WXH6 277 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 SPSB4Q96A44 273 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 TECTBQ96PL2 329 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 ABHD6Q9BV23 337 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 TEX12Q9BXU0 123 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 MS4A7Q9GZW8 240 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 ESM1Q9NQ30 184 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 TRIM36Q9NQ86 728 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 C14orf119Q9NWQ9 140 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 C1orf123Q9NWV4 160 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 DNAJC27Q9NZQ0 273 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZNF69Q9UC07 566 aa10.32□□□□□ -0.76
CTDNEP1-205ENST00000570828 hCG_1807616A0A1W2PRN6 198 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 PRR23D1E9PI22 279 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 LGALS8O00214 317 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 GRPP07492 148 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 H2BFMP0C1H6 154 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 PRR23D2P0DMB1 279 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 CFL1P23528 166 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 CFPP27918 469 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 NPY4RP50391 375 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZNF121P58317 390 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 PAX2Q02962 417 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 GINS1Q14691 196 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 SFRP4Q6FHJ7 346 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 LYPD2Q6UXB3 125 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 FAM57BQ71RH2 274 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 DOK3Q7L591 496 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 SLC16A9Q7RTY1 509 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 TMEM179BQ7Z7N9 219 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 C3orf56Q8N813 242 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 OR52H1Q8NGJ2 320 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZMYND19Q96E35 227 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 REEP6Q96HR9 211 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 NUDT16L1Q9BRJ7 211 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 OR10A2Q9H208 303 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 MARCH7Q9H992 704 aa10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 ZMAT3Q9HA38 289 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-205ENST00000570828 IGHV3OR16-10A0A075B7F0 116 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 TRAV38-1A0A0B4J264 116 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 TRAV40A0A0B4J280 105 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 OOEPA6NGQ2 149 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 DNAJC9-AS1A6NH13 148 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 PRODHO43272 600 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 HMGN1P05114 100 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 IGHV4-38-2P0DP08 117 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 OSMP13725 252 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 GNALP38405 381 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 PSMB10P40306 273 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 OPRL1P41146 370 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 CBX1P83916 185 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 FAM3AP98173 230 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 RHOUQ7L0Q8 258 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 TIGD4Q8IY51 512 aa10.3□□□□□ -0.76
CTDNEP1-205ENST00000570828 BCL6BQ8N143 479 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms