RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 HMG20AQ9NP66 347 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SPANXA1Q9NS26 97 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 DDX19AQ9NUU7 478 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 SIGLEC8Q9NYZ4 499 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CLEC2DQ9UHP7 191 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 BTNL2Q9UIR0 455 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 RPH3ALQ9UNE2 315 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 UTP11Q9Y3A2 253 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 NCOR2Q9Y618 2525 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 DOCK1Q14185 1865 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 MED23Q9ULK4 1368 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 CHD6Q8TD26 2715 aa2.45□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF532Q9HCE3 1301 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MYH2Q9UKX2 1941 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 GPR179Q6PRD1 2367 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 CDK5RAP2Q96SN8 1893 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 OTOGLQ3ZCN5 2332 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 IGKV6D-21A0A0A0MT36 114 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 ISPDA4D126 451 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 VSTM2BA6NLU5 285 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 A8MUI8 341 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TCAPO15273 167 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MSH4O15457 936 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 COCHO43405 550 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PRKYO43930 277 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TPST1O60507 370 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PLIN3O60664 434 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 EIF1BO60739 113 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 DPM1O60762 260 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 NPIPB7O75200 414 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 ECI2O75521 394 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TNFAIP8O95379 198 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SERPINA3P01011 423 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SERPIND1P05546 499 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 FBP1P09467 338 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 UQCRFS1P1P0C7P4 283 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TRAPPC2P0DI81 140 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TRAPPC2BP0DI82 140 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 GIMD1P0DJR0 217 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 COX5BP10606 129 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 THRAP10827 490 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SLC2A1P11166 492 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PSG2P11465 335 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 ETS2P15036 469 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 IMPDH1P20839 514 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 G0S2P27469 103 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 IL12AP29459 219 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 CA5AP35218 305 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 UGT1A5P35504 534 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 NAA10P41227 235 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 EIF1P41567 113 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 GPR4P46093 362 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 IDH3GP51553 393 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 NKX2-5P52952 324 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PLA2G16P53816 162 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 UCNP55089 124 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SNAP25P60880 206 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 RPL23AP62750 156 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 DYNLL1P63167 89 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 KCNJ2P63252 427 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 CNTN2Q02246 1040 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 BIKQ13323 160 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MED21Q13503 144 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PIGHQ14442 188 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 C16orf72Q14CZ0 275 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TRAM2Q15035 370 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SLC36A3Q495N2 470 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 NADK2Q4G0N4 442 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PTPN20Q4JDL3 420 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 BCL7AQ4VC05 210 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 DNLZQ5SXM8 178 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MFSD14CQ5VZR4 134 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TTC23Q5W5X9 447 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MRPL52Q86TS9 123 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 CYP4Z1Q86W10 505 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 ZBTB8OSQ8IWT0 167 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 FADS6Q8N9I5 356 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 SUMF2Q8NBJ7 301 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 NECAP1Q8NC96 275 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 STEAP2Q8NFT2 490 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 OR10T2Q8NGX3 314 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 OR51A7Q8NH64 312 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 OR6X1Q8NH79 312 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 COQ8AQ8NI60 647 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MAGEE2Q8TD90 523 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PIH1D2Q8WWB5 315 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 C1orf54Q8WWF1 131 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 FAM3CQ92520 227 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 AP3S1Q92572 193 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 IL22RA2Q969J5 263 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 MYLPFQ96A32 169 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 KIAA1143Q96AT1 154 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TESCQ96BS2 214 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 RPUSD4Q96CM3 377 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 GLT1D1Q96MS3 346 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 PFDN5Q99471 154 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 TEAD3Q99594 435 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 GPA33Q99795 319 aa2.44□□□□□ -2.02
HERPUD1-212ENST00000567944 C7orf50Q9BRJ6 194 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms