RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LHBP01229 141 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 GYPAP02724 150 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 ANXA2P07355 339 aaKnown RBP15.2■□□□□ 0.02
USB1-213ENST00000566292 SLC15A1P46059 708 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 DEFB112Q30KQ8 113 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 KLHL12Q53G59 568 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 TMEM179BQ7Z7N9 219 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 WDR86Q86TI4 376 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 FAM90A1Q86YD7 464 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 C11orf53Q8IXP5 236 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 ADGRG5Q8IZF4 528 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 REEP6Q96HR9 211 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 RASSF4Q9H2L5 321 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 TOR3AQ9H497 397 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 PPP1R3EQ9H7J1 279 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 DNAJC27Q9NZQ0 273 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 ZNF319Q9P2F9 582 aa15.2■□□□□ 0.02
USB1-213ENST00000566292 PRPF19Q9UMS4 504 aaKnown RBP15.2■□□□□ 0.02
USB1-213ENST00000566292 TRAV38-1A0A0B4J264 116 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.19■□□□□ 0.02
USB1-213ENST00000566292 hCG_38984A0A1B0GV85 526 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 ANKRD30BLA7E2S9 258 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 H3BN98 237 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 ACOT8O14734 319 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 GLCEO94923 617 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 FAM107AO95990 144 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 CST1P01037 141 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 SFTPBP07988 381 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 MMP9P14780 707 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 HSD11B1P28845 292 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 GSTT1P30711 240 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 CFHR2P36980 270 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 DDOSTP39656 456 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 ZNF121P58317 390 aaPredicted RBP15.19■□□□□ 0.02
USB1-213ENST00000566292 POU4F2Q12837 409 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 GK3PQ14409 553 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 TIGD6Q17RP2 521 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 RUSC1-AS1Q66K80 236 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 FAM57BQ71RH2 274 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 TIGD4Q8IY51 512 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 CCDC197Q8NCU1 140 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 OTULINQ96BN8 352 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 PCGF1Q9BSM1 259 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 CHID1Q9BWS9 393 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 PRDM13Q9H4Q3 707 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 TRIM36Q9NQ86 728 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 C14orf119Q9NWQ9 140 aa15.19■□□□□ 0.02
USB1-213ENST00000566292 IGHV3OR15-7A0A075B7D8 119 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 hCG_1807616A0A1W2PRN6 198 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 ARRDC5A6NEK1 342 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 ZNF879B4DU55 563 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 TMPRSS2O15393 492 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 NDUFA2O43678 99 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 OPRL1P41146 370 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 MZT1Q08AG7 82 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 GPR157Q5UAW9 335 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 TEX36Q5VZQ5 186 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 CD276Q5ZPR3 534 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 OR8S1Q8NH09 359 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 CANT1Q8WVQ1 401 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 LRGUKQ96M69 825 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 TBX15Q96SF7 602 aa15.18■□□□□ 0.02
USB1-213ENST00000566292 UNKLQ9H9P5 680 aaKnown RBP15.18■□□□□ 0.02
USB1-213ENST00000566292 HOXA3O43365 443 aaPredicted RBP15.17■□□□□ 0.02
USB1-213ENST00000566292 APOC1P02654 83 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 GSK3AP49840 483 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 ELF3P78545 371 aaPredicted RBP15.17■□□□□ 0.02
USB1-213ENST00000566292 C16orf87Q6PH81 154 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 SHISA2Q6UWI4 295 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 SHFQ7M4L6 423 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 OR1M1Q8NGA1 313 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 LRRC29Q8WV35 223 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 THTPAQ9BU02 230 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 C1orf21Q9H246 121 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 OR51V1Q9H2C8 321 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 SP140LQ9H930 580 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 BRD7Q9NPI1 651 aa15.17■□□□□ 0.02
USB1-213ENST00000566292 PDP1Q9P0J1 537 aaPredicted RBP15.17■□□□□ 0.02
USB1-213ENST00000566292 MEGF8Q7Z7M0 2845 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.16■□□□□ 0.02
USB1-213ENST00000566292 P2RY10O00398 339 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 DVL1O14640 695 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 SELENOFO60613 162 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 TOX4O94842 621 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 LIPFP07098 398 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 POU1F1P28069 291 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 BPIFB3P59826 476 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 CSNK2BP67870 215 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 IL13RA1P78552 427 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 GINS1Q14691 196 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 GFOD2Q3B7J2 385 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 PLBD1Q6P4A8 553 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 WDR82Q6UXN9 313 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 RHOUQ7L0Q8 258 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 HS3ST5Q8IZT8 346 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 FGFRL1Q8N441 504 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 OR52H1Q8NGJ2 320 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 ZDHHC16Q969W1 377 aa15.16■□□□□ 0.02
USB1-213ENST00000566292 WDFY2Q96P53 400 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms