RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LINC01356Q8N9X3 169 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 C1orf159Q96HA4 380 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 Q96MT0 163 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 ADI1Q9BV57 179 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 SLC22A4Q9H015 551 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 RGCCQ9H4X1 137 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 PPP1R3CQ9UQK1 317 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 EXOGQ9Y2C4 368 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
HERPUD1-210ENST00000565966 TMEM269A0A1B0GVZ9 245 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 PNPP00491 289 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 HLA-DPB1P04440 258 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 DBTP11182 482 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 CFL1P23528 166 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 DDOSTP39656 456 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 CAPGP40121 348 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 MMP16P51512 607 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 CDH15P55291 814 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 MFGE8Q08431 387 aaPredicted RBP11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF829Q3KNS6 432 aaPredicted RBP11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 MEGF10Q96KG7 1140 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 PBOV1Q9GZY1 135 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 VCXQ9H320 206 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 AMBNQ9NP70 447 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 TMEM106BQ9NUM4 274 aa11.68□□□□□ -0.54
HERPUD1-210ENST00000565966 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 B4DSR2 109 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 F5H5P2 479 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 H0YAE9 185 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 SULT1C4O75897 302 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 KRT8P05787 483 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 CA6P23280 308 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 GSK3AP49840 483 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 LMO4P61968 165 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 ACTC1P68032 377 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 ACTA1P68133 377 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 SMN1Q16637 294 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 PLEKHG7Q6ZR37 379 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 SETD9Q8NE22 299 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 CNIH3Q8TBE1 160 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 SIGLEC11Q96RL6 698 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 GCM1Q9NP62 436 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 G6PC2Q9NQR9 355 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 NUFIP1Q9UHK0 495 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF391Q9UJN7 358 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 RPL36Q9Y3U8 105 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 PCDHGB1Q9Y5G3 927 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 NPTNQ9Y639 398 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 R4GMQ9 66 aa11.67□□□□□ -0.54
HERPUD1-210ENST00000565966 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 DAPL1A0PJW8 107 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 FAM157AC9JC47 383 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 GMDSO60547 372 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 RPP14O95059 124 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 IGLV3-1P01715 115 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 TTRP02766 147 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 ISL1P61371 349 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 HNRNPA0Q13151 305 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 MAB21L1Q13394 359 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 IL18R1Q13478 541 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 OR8G1Q15617 311 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 OR8B8Q15620 311 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 CHRFAM7AQ494W8 412 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 ACBD7Q8N6N7 88 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 CELF2-AS1Q8N7Q2 184 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 MOB1AQ9H8S9 216 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 DCAF16Q9NXF7 216 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 LPAR3Q9UBY5 353 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
HERPUD1-210ENST00000565966 SVEP1Q4LDE5 3571 aa11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 IGHV3-64DA0A0J9YX35 117 aa11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 ISPDA4D126 451 aa11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 H0YJX3 145 aa11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 FADS2O95864 444 aaKnown RBP11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 IGHV2-70P01814 119 aa11.65□□□□□ -0.54
HERPUD1-210ENST00000565966 IGHA1P01876 353 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms