RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ESCO2Q56NI9 601 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 AADACL4Q5VUY2 407 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 DCAF12L2Q5VW00 463 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF771Q7L3S4 317 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-211ENST00000565922 IL4I1Q96RQ9 567 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PKP2Q99959 881 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 ABCB9Q9NP78 766 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 G6PC2Q9NQR9 355 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 HAO2Q9NYQ3 351 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 MIOXQ9UGB7 285 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 LRCH1Q9Y2L9 728 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 KLHDC2Q9Y2U9 406 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 PPIAL4AQ9Y536 164 aa16.69■□□□□ 0.26
CMTM3-211ENST00000565922 ARHGAP32A7KAX9 2087 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 IGHV3-64DA0A0J9YX35 117 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 CEACAM18A8MTB9 384 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 GSK3AP49840 483 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 RIDAP52758 137 aaKnown RBP16.68■□□□□ 0.26
CMTM3-211ENST00000565922 CDC42P60953 191 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 ROM1Q03395 351 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 POU4F2Q12837 409 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 OR8B8Q15620 311 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 KCNJ8Q15842 424 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF829Q3KNS6 432 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-211ENST00000565922 PRAMEF6Q5VXH4 476 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 NLRC3Q7RTR2 1065 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF679Q8IYX0 411 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 OR8J1Q8NGP2 316 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 OR8B4Q96RC9 309 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 TRIM36Q9NQ86 728 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 UFSP2Q9NUQ7 469 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 RNF7Q9UBF6 113 aa16.68■□□□□ 0.26
CMTM3-211ENST00000565922 WARS2Q9UGM6 360 aaKnown RBP16.68■□□□□ 0.26
CMTM3-211ENST00000565922 ANXA2P2A6NMY6 339 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 A8MXK9 166 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 F5H0A9 414 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-211ENST00000565922 H3BNX3 289 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 M0R129 80 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 FAM20BO75063 409 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 RPS2P15880 293 aaKnown RBP16.67■□□□□ 0.26
CMTM3-211ENST00000565922 LCN2P80188 198 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 TMED1Q13445 227 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF404Q494X3 552 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 SLC35F2Q8IXU6 374 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 RFKQ969G6 155 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 PAPOLGQ9BWT3 736 aaKnown RBP16.67■□□□□ 0.26
CMTM3-211ENST00000565922 TMEM165Q9HC07 324 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 CLN6Q9NWW5 311 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 USE1Q9NZ43 259 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF319Q9P2F9 582 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 METRNQ9UJH8 293 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 IKZF2Q9UKS7 526 aa16.67■□□□□ 0.26
CMTM3-211ENST00000565922 POLR3KQ9Y2Y1 108 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-211ENST00000565922 TMEM269A0A1B0GVZ9 245 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 A6NLC8 198 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF670-ZNF695F2Z2N8 137 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 ALPLP05186 524 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 PMELP40967 661 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 ALDH3A2P51648 485 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 HCCSP53701 268 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 IL5RAQ01344 420 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 HNRNPA0Q13151 305 aaKnown RBP16.66■□□□□ 0.26
CMTM3-211ENST00000565922 MPPED2Q15777 294 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 DCDC5Q6ZRR9 648 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 RFLNBQ8N5W9 214 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 OR8B12Q8NGG6 310 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 TRUB1Q8WWH5 349 aaKnown RBP16.66■□□□□ 0.26
CMTM3-211ENST00000565922 DVL3Q92997 716 aaPredicted RBP16.66■□□□□ 0.26
CMTM3-211ENST00000565922 MOB1AQ9H8S9 216 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 ADGRL4Q9HBW9 690 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 IMPAD1Q9NX62 359 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 OR5V1Q9UGF6 321 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 MPC1Q9Y5U8 109 aa16.66■□□□□ 0.26
CMTM3-211ENST00000565922 A0A0U1RQV5 110 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 EI24O14681 340 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 GRPP07492 148 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 ATP6V1B1P15313 513 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 HTR1FP30939 366 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 CXCR4P61073 352 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 EGR3Q06889 387 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 ZNF322Q6U7Q0 402 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-211ENST00000565922 BCDIN3DQ7Z5W3 292 aaKnown RBP16.65■□□□□ 0.26
CMTM3-211ENST00000565922 OR8B3Q8NGG8 313 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 FAM81AQ8TBF8 368 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 TMEM158Q8WZ71 300 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 NEIL1Q96FI4 390 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-211ENST00000565922 OR8B2Q96RD0 313 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 MICU1Q9BPX6 476 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 TMEM246Q9BRR3 403 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 C9orf16Q9BUW7 83 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 SSBP3Q9BWW4 388 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-211ENST00000565922 FAM206AQ9NX38 181 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 COPS3Q9UNS2 423 aa16.65■□□□□ 0.26
CMTM3-211ENST00000565922 SVEP1Q4LDE5 3571 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 hCG_1807616A0A1W2PRN6 198 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 PSMD9O00233 223 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 PHF1O43189 567 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-211ENST00000565922 ZNF205O95201 554 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 WNT2P09544 360 aa16.64■□□□□ 0.25
CMTM3-211ENST00000565922 POLR2IP36954 125 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms