RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TRAV40A0A0B4J280 105 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.01□□□□□ -0.33
CDH3-204ENST00000565453 OOEPA6NGQ2 149 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 CLDN34H7C241 214 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 FCN3O75636 299 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 APOC1P02654 83 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 GRPP07492 148 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 OSMP13725 252 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
CDH3-204ENST00000565453 EGR1P18146 543 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 HSD11B1P28845 292 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 NPY4RP50391 375 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 FGF12P61328 243 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 CDK5Q00535 292 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 BAMBIQ13145 260 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 KCNJ8Q15842 424 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 TIGD6Q17RP2 521 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 FAM57BQ71RH2 274 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 FAM90A1Q86YD7 464 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 C3orf56Q8N813 242 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
CDH3-204ENST00000565453 OTULINQ96BN8 352 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
CDH3-204ENST00000565453 OR51V1Q9H2C8 321 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 PPP1R3EQ9H7J1 279 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 SP140LQ9H930 580 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 SMURF1Q9HCE7 757 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 C14orf119Q9NWQ9 140 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 DOCK11Q5JSL3 2073 aa13.01□□□□□ -0.33
CDH3-204ENST00000565453 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
CDH3-204ENST00000565453 ANKRD30BLA7E2S9 258 aa13□□□□□ -0.33
CDH3-204ENST00000565453 PRR23D1E9PI22 279 aaPredicted RBP13□□□□□ -0.33
CDH3-204ENST00000565453 GNGT2O14610 69 aa13□□□□□ -0.33
CDH3-204ENST00000565453 NDUFA2O43678 99 aa13□□□□□ -0.33
CDH3-204ENST00000565453 ENSAO43768 121 aaKnown RBP13□□□□□ -0.33
CDH3-204ENST00000565453 SELENOFO60613 162 aa13□□□□□ -0.33
CDH3-204ENST00000565453 RNASE1P07998 156 aaKnown RBP13□□□□□ -0.33
CDH3-204ENST00000565453 PRR23D2P0DMB1 279 aaPredicted RBP13□□□□□ -0.33
CDH3-204ENST00000565453 POU1F1P28069 291 aa13□□□□□ -0.33
CDH3-204ENST00000565453 MTNR1AP48039 350 aa13□□□□□ -0.33
CDH3-204ENST00000565453 GSK3AP49840 483 aa13□□□□□ -0.33
CDH3-204ENST00000565453 MZT1Q08AG7 82 aa13□□□□□ -0.33
CDH3-204ENST00000565453 OR8B8Q15620 311 aa13□□□□□ -0.33
CDH3-204ENST00000565453 TEX36Q5VZQ5 186 aa13□□□□□ -0.33
CDH3-204ENST00000565453 PLBD1Q6P4A8 553 aa13□□□□□ -0.33
CDH3-204ENST00000565453 TRPM8Q7Z2W7 1104 aa13□□□□□ -0.33
CDH3-204ENST00000565453 PAPD5Q8NDF8 572 aaKnown RBP13□□□□□ -0.33
CDH3-204ENST00000565453 OR52H1Q8NGJ2 320 aa13□□□□□ -0.33
CDH3-204ENST00000565453 OTOSQ8NHW6 89 aa13□□□□□ -0.33
CDH3-204ENST00000565453 SLC7A6OSQ96CW6 309 aaPredicted RBP13□□□□□ -0.33
CDH3-204ENST00000565453 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
CDH3-204ENST00000565453 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
CDH3-204ENST00000565453 TRIM36Q9NQ86 728 aa13□□□□□ -0.33
CDH3-204ENST00000565453 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
CDH3-204ENST00000565453 DNAJC27Q9NZQ0 273 aa13□□□□□ -0.33
CDH3-204ENST00000565453 ERVK-18Q9QC07 812 aa13□□□□□ -0.33
CDH3-204ENST00000565453 MDFIC2A0A1B0GVS7 189 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 A6NLC8 198 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 PRODHO43272 600 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 ADAM20O43506 726 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 GYPAP02724 150 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 HMGN1P05114 100 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 LYNP07948 512 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 MMP9P14780 707 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 PAICSP22234 425 aaKnown RBP12.99□□□□□ -0.33
CDH3-204ENST00000565453 PRKACGP22612 351 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 SLC2A5P22732 501 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 CFL1P23528 166 aaKnown RBP12.99□□□□□ -0.33
CDH3-204ENST00000565453 SLC9A3R2Q15599 337 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 CPOQ8IVL8 374 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 BBS1Q8NFJ9 593 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 OR1M1Q8NGA1 313 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 OR8S1Q8NH09 359 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 TLNRD1Q9H1K6 362 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 OR10A2Q9H208 303 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 RNPEPL1Q9HAU8 725 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 SLC25A19Q9HC21 320 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 KAAG1Q9UBP8 84 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 RHBDD3Q9Y3P4 386 aa12.99□□□□□ -0.33
CDH3-204ENST00000565453 hCG_1807616A0A1W2PRN6 198 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ZNF879B4DU55 563 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.98□□□□□ -0.33
CDH3-204ENST00000565453 DYNC1I1O14576 645 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 FKBP6O75344 327 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 ANXA8P13928 327 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 CFHR2P36980 270 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 CSNK2BP67870 215 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 CBX1P83916 185 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 FOXL1Q12952 345 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 FLOT2Q14254 428 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 DNAL1Q4LDG9 190 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 SLC35D3Q5M8T2 416 aa12.98□□□□□ -0.33
CDH3-204ENST00000565453 CD276Q5ZPR3 534 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms