RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 NLRC3Q7RTR2 1065 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 BPIFB2Q8N4F0 458 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 ZNF454Q8N9F8 522 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 OR52H1Q8NGJ2 320 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 OR5K1Q8NHB7 308 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 MRI1Q9BV20 369 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 TEX12Q9BXU0 123 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 OR10A2Q9H208 303 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 SP140LQ9H930 580 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 C1orf123Q9NWV4 160 aa16.68■□□□□ 0.26
SHCBP1-203ENST00000564272 FBN3Q75N90 2809 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 CCDC182A6NF36 153 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 A6NLC8 198 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 M0R129 80 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 CPT2P23786 658 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 DDOSTP39656 456 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 GSK3AP49840 483 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 HCCSP53701 268 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 PAX2Q02962 417 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 KLF17Q5JT82 389 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 SFRP4Q6FHJ7 346 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 DCDC5Q6ZRR9 648 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 USP43Q70EL4 1123 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 RHOUQ7L0Q8 258 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 PARP8Q8N3A8 854 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 SPERTQ8NA61 448 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 SUCNR1Q9BXA5 334 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 MMADHCQ9H3L0 296 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 PPP1R3EQ9H7J1 279 aa16.67■□□□□ 0.26
SHCBP1-203ENST00000564272 IGHV2-70DA0A0C4DH43 119 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 C3orf80F5H4A9 247 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 LGALS8O00214 317 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 MRPL3P09001 348 aaKnown RBP16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 RASSF2P50749 326 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 PSMA6P60900 246 aaKnown RBP16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 PTGES3Q15185 160 aaKnown RBP16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 C1orf146Q5VVC0 180 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 WDR86Q86TI4 376 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 PLPP7Q8NBV4 271 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 OR8S1Q8NH09 359 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 C14orf119Q9NWQ9 140 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 CTSZQ9UBR2 303 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 LRP12Q9Y561 859 aa16.66■□□□□ 0.26
SHCBP1-203ENST00000564272 hCG_1807616A0A1W2PRN6 198 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 PRKYO43930 277 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 ALOX5APP20292 161 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 CFL1P23528 166 aaKnown RBP16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 PAX8Q06710 450 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 OR8B8Q15620 311 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 ZFAND2BQ8WV99 257 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 DACT3Q96B18 629 aaPredicted RBP16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 PAPOLGQ9BWT3 736 aaKnown RBP16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 ESM1Q9NQ30 184 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 KRT84Q9NSB2 600 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 CLN8Q9UBY8 286 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 ZNF69Q9UC07 566 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 LAMP5Q9UJQ1 280 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 RHBDD3Q9Y3P4 386 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 DOCK11Q5JSL3 2073 aa16.65■□□□□ 0.26
SHCBP1-203ENST00000564272 ANK2Q01484 3957 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 PHYHO14832 338 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 ATP5HO75947 161 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 EGR1P18146 543 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 EPHA2P29317 976 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 ESRRGP62508 458 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 CSNK2BP67870 215 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 MZT1Q08AG7 82 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 WDR25Q64LD2 544 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 BTNL3Q6UXE8 466 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 ZNF841Q6ZN19 808 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 BCDIN3DQ7Z5W3 292 aaKnown RBP16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 KRT77Q7Z794 578 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 AMIGO2Q86SJ2 522 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 GCSAMQ8N6F7 178 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 OR8B12Q8NGG6 310 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 RAB40AQ8WXH6 277 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 LYZL4Q96KX0 146 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 TEAD3Q99594 435 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 TTTY10Q9BZA0 68 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 YIPF3Q9GZM5 350 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 RGCCQ9H4X1 137 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 NUP50Q9UKX7 468 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 AP4S1Q9Y587 144 aa16.64■□□□□ 0.25
SHCBP1-203ENST00000564272 IGHV3OR16-10A0A075B7F0 116 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 OOEPA6NGQ2 149 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 PRR32B1ATL7 298 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 C22orf46C9J442 243 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 G3V2T6 193 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 PSMD9O00233 223 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 FPR2P25090 351 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 ACKR3P25106 362 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 FASP25445 335 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 GNALP38405 381 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 PSMB10P40306 273 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 LCN1P1Q5VSP4 162 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 C11orf53Q8IXP5 236 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 CSNK2A3Q8NEV1 391 aa16.63■□□□□ 0.25
SHCBP1-203ENST00000564272 OR1M1Q8NGA1 313 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms