RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 IGHV4-59P01825 116 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 ENTPD1P49961 510 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 SAMD4BQ5PRF9 694 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 RHOUQ7L0Q8 258 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OR4C15Q8NGM1 316 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 DYRK2Q92630 601 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 OPA3Q9H6K4 179 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 MED4Q9NPJ6 270 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 CENPMQ9NSP4 180 aa13.78□□□□□ -0.2
VPS9D1-AS1-201ENST00000562298 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZNF878C9JN71 531 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZNF593O00488 134 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 XRCC2O43543 280 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 KRT36O76013 467 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CLUP10909 449 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 IER3P46695 156 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RPL15P61313 204 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM3AP98173 230 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CRMP1Q14194 572 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TAF13Q15543 124 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TEX30Q5JUR7 227 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RASSF6Q6ZTQ3 369 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SLC16A9Q7RTY1 509 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TBC1D15Q8TC07 691 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ST8SIA4Q92187 359 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 NMNAT2Q9BZQ4 307 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM107BQ9H098 131 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PPP1R3EQ9H7J1 279 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 C14orf119Q9NWQ9 140 aa13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RPUSD1Q9UJJ7 312 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DHRS12A0PJE2 317 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ANKRD30BLA7E2S9 258 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TNFRSF11BO00300 401 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TBX1O43435 398 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 GPR137BO60478 399 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ECDO95905 644 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SPI1P17947 270 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FMO3P31513 532 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CX3CR1P49238 355 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CSNK2BP67870 215 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MZT1Q08AG7 82 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PPP1R8Q12972 351 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 C11orf91Q3C1V1 193 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CDONQ4KMG0 1287 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SCCPDHQ8NBX0 429 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR1M1Q8NGA1 313 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR8S1Q8NH09 359 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LRRC29Q8WV35 223 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SGK3Q96BR1 496 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SEH1LQ96EE3 360 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CCL13Q99616 98 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CNTD2Q9H8S5 307 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RNF114Q9Y508 228 aa13.76□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SNX3O60493 162 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 DDOSTP39656 456 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SLC25A1P53007 311 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 KLHL12Q53G59 568 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 WDR38Q5JTN6 314 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LINC01590Q5TEZ4 76 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 WDR82Q6UXN9 313 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PRSS45Q7RTY3 260 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LINC00471Q8N535 108 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 FAM216BQ8N7L0 139 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 AQP11Q8NBQ7 271 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 LY6G5BQ8NDX9 201 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 OR6K6Q8NGW6 343 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 REEP6Q96HR9 211 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TSSK6Q9BXA6 273 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 RNPEPL1Q9HAU8 725 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ZNF319Q9P2F9 582 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 KPTNQ9Y664 436 aa13.75□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 hCG_38984A0A1B0GV85 526 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 A0A1B0GVI7 797 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CLPXO76031 633 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 CCNB2O95067 398 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 SOX14O95416 240 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ANXA2P07355 339 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MUC1P15941 1255 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 AMY2BP19961 511 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 ATP6V1B2P21281 511 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 GRK5P34947 590 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MAGEA2P43356 314 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 PROK1P58294 105 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 GRB2P62993 217 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 EIF2B1Q14232 305 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TAF9Q16594 264 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
VPS9D1-AS1-201ENST00000562298 MICBQ29980 383 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms