RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	RAB23	Q9ULC3	237 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	CELA1	Q9UNI1	258 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	PRELID3B	Q9Y3B1	194 aa		3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	RPL36	Q9Y3U8	105 aa	Known RBP	3.75	□□□□□ -1.81
TCF12-223	ENST00000561235	NRCAM	Q92823	1304 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNFX1	Q9P2E3	1918 aa	Known RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	IGHV3OR16-13	A0A075B7E8	117 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235		A0A1B0GUH1	482 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	TMEM120B	A0PK00	339 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	CCDC182	A6NF36	153 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	HCRTR1	O43613	425 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	GMDS	O60547	372 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	CCNK	O75909	580 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	OR2F2	O95006	317 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	CCNB2	O95067	398 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB3D	O95716	219 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	MB	P02144	154 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	DUX4L4	P0CJ87	422 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	SMIM6	P0DI80	62 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	COX4I1	P13073	169 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ELK1	P19419	428 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	CXCR2	P25025	360 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	RORA	P35398	523 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	CD79B	P40259	229 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	GYG1	P46976	350 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	HCAR3	P49019	387 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB13	P51153	203 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	SELENOT	P62341	195 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	PAX5	Q02548	391 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ORC2	Q13416	577 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	POU6F1	Q14863	301 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	OXA1L	Q15070	435 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	MICB	Q29980	383 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	OTP	Q5XKR4	325 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	TMEM220	Q6QAJ8	160 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	HSDL2	Q6YN16	418 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	DCXR	Q7Z4W1	244 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	PLCZ1	Q86YW0	608 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	MFSD6L	Q8IWD5	586 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	FNDC5	Q8NAU1	212 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	TCP10L	Q8TDR4	215 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	NTAN1	Q96AB6	310 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	KIAA1143	Q96AT1	154 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	OTUB2	Q96DC9	234 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	OXGR1	Q96P68	337 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.74	□□□□□ -1.81	2e-8	■■■■■ 33.2
TCF12-223	ENST00000561235	NAT9	Q9BTE0	207 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ZYG11B	Q9C0D3	744 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ELOVL6	Q9H5J4	265 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	RNF167	Q9H6Y7	350 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	TREM1	Q9NP99	234 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ADAM22	Q9P0K1	906 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	ENOPH1	Q9UHY7	261 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	MED23	Q9ULK4	1368 aa		3.74	□□□□□ -1.81
TCF12-223	ENST00000561235	USP9X	Q93008	2570 aa	Predicted RBP	3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ARAP2	Q8WZ64	1704 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	NSG1	A0A0A6YYJ2	146 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235		A0A1W2PPE3	182 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235		A0A1W2PQ67	120 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	CCDC160	A6NGH7	325 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	USP27X	A6NNY8	438 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	C12orf71	A8MTZ7	269 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	HAS3	O00219	553 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	HSD17B6	O14756	317 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	RRP8	O43159	456 aa	Known RBP	3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	OR7A10	O76100	309 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	CCNE2	O96020	404 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	TNNC2	P02585	160 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	IFNA4	P05014	189 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	HPN	P05981	417 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ETS2	P15036	469 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	TCP1	P17987	556 aa	Known RBP	3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	COX7A1	P24310	79 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	DDOST	P39656	456 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	SERPINB9	P50453	376 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	PLP1	P60201	277 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	MED21	Q13503	144 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ART3	Q13508	389 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	PON3	Q15166	354 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ANGPT1	Q15389	498 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	SGCA	Q16586	387 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ALKBH6	Q3KRA9	238 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	SAMD4B	Q5PRF9	694 aa	Known RBP	3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	TIGD3	Q6B0B8	471 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	C11orf71	Q6IPW1	123 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	RTL4	Q6ZR62	310 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF767P	Q75MW2	155 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	GDPD3	Q7L5L3	318 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	COPS6	Q7L5N1	327 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	PRSS41	Q7RTY9	318 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	SLC26A11	Q86WA9	606 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	CCDC71L	Q8N9Z2	235 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	GATS	Q8NAP1	163 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	LRRC20	Q8TCA0	184 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	CD300LF	Q8TDQ1	290 aa		3.73	□□□□□ -1.81
TCF12-223	ENST00000561235	UFD1	Q92890	307 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms