RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SFTPBP07988 381 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 MMP9P14780 707 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 ZNF3P17036 446 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 CX3CR1P49238 355 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 FAM3AP98173 230 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 EIF2B1Q14232 305 aaKnown RBP13.45□□□□□ -0.26
SNX1-213ENST00000561026 SLC16A9Q7RTY1 509 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 PRSS45Q7RTY3 260 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 FAM90A1Q86YD7 464 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 PNLDC1Q8NA58 520 aaKnown RBP13.45□□□□□ -0.26
SNX1-213ENST00000561026 OR8S1Q8NH09 359 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 RNF133Q8WVZ7 376 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 NIPSNAP1Q9BPW8 284 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 RASSF4Q9H2L5 321 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 NOX4Q9NPH5 578 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 hCG_1807616A0A1W2PRN6 198 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 FAM183AA6NL82 134 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 TOX4O94842 621 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 ANXA2P07355 339 aaKnown RBP13.44□□□□□ -0.26
SNX1-213ENST00000561026 C11orf91Q3C1V1 193 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 TEX36Q5VZQ5 186 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 Q6YL49 198 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 RHOUQ7L0Q8 258 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 DPY19L4Q7Z388 723 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 C11orf53Q8IXP5 236 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 OR10G2Q8NGC3 310 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 REEP6Q96HR9 211 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 INTS14Q96SY0 518 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 ABHD6Q9BV23 337 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 SP140LQ9H930 580 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 MED20Q9H944 212 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 KAAG1Q9UBP8 84 aa13.44□□□□□ -0.26
SNX1-213ENST00000561026 CENPVL3A0A0U1RRI6 287 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 DVL1O14640 695 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 WIPF1O43516 503 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 FCN3O75636 299 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 APOC1P02654 83 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 RAP2AP10114 183 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
SNX1-213ENST00000561026 HSD11B1P28845 292 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 GSTT1P30711 240 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 GRK5P34947 590 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 POU4F2Q12837 409 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 GK3PQ14409 553 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 TIGD6Q17RP2 521 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 RUSC1-AS1Q66K80 236 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 WDR86Q86TI4 376 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 ERI1Q8IV48 349 aaKnown RBP13.43□□□□□ -0.26
SNX1-213ENST00000561026 OR52H1Q8NGJ2 320 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 TEX47Q8TBZ9 253 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 FEVQ99581 238 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 MARCH7Q9H992 704 aa13.43□□□□□ -0.26
SNX1-213ENST00000561026 hCG_38984A0A1B0GV85 526 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 FAM181BA6NEQ2 426 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 ECDO95905 644 aaPredicted RBP13.42□□□□□ -0.26
SNX1-213ENST00000561026 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
SNX1-213ENST00000561026 OMGP23515 440 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
SNX1-213ENST00000561026 OPRL1P41146 370 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 GSK3AP49840 483 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
SNX1-213ENST00000561026 MICBQ29980 383 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 METTL11BQ5VVY1 283 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 FAM57BQ71RH2 274 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 BTN2A1Q7KYR7 527 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 SHFQ7M4L6 423 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 TIGD4Q8IY51 512 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 IQCF1Q8N6M8 205 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 OR1M1Q8NGA1 313 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 GIPC3Q8TF64 312 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 OTULINQ96BN8 352 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 FAM71F1Q96KD3 344 aaPredicted RBP13.42□□□□□ -0.26
SNX1-213ENST00000561026 CCT8L2Q96SF2 557 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 AMELYQ99218 206 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 CHID1Q9BWS9 393 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 DNAJC27Q9NZQ0 273 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 ZNF319Q9P2F9 582 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
SNX1-213ENST00000561026 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 ARRDC5A6NEK1 342 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 H3BN98 237 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 TIPRLO75663 272 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 GLCEO94923 617 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 CST1P01037 141 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 T-ENOLP0DO92 83 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 CALB2P22676 271 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 PDCD1Q15116 288 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms