RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, human

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-223	ENST00000560445	POU1F1	P28069	291 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	CD80	P33681	288 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	PSMB10	P40306	273 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	SLC35D3	Q5M8T2	416 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	PRAMEF6	Q5VXH4	476 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	DPY19L4	Q7Z388	723 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	ADGRG5	Q8IZF4	528 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	SIGLECL1	Q8N7X8	197 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	ZDHHC22	Q8N966	263 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	CANT1	Q8WVQ1	401 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	C22orf15	Q8WYQ4	148 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	REEP6	Q96HR9	211 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	PGAM5	Q96HS1	289 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	MICU1	Q9BPX6	476 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	ABHD6	Q9BV23	337 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	MARCH7	Q9H992	704 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	C1orf123	Q9NWV4	160 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	PDP1	Q9P0J1	537 aa	Predicted RBP	11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	ZNF69	Q9UC07	566 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	N6AMT1	Q9Y5N5	214 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	MPC1	Q9Y5U8	109 aa		11.76	□□□□□ -0.53
TPM1-223	ENST00000560445	TRAV40	A0A0B4J280	105 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	DNAJC9-AS1	A6NH13	148 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	P2RY10	O00398	339 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	GPR37	O15354	613 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	ADAM20	O43506	726 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	DNAJC8	O75937	253 aa	Predicted RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	ZNF205	O95201	554 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	LYN	P07948	512 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	RNASE1	P07998	156 aa	Known RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	HKR1	P10072	659 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	OSM	P13725	252 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	PMEL	P40967	661 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	RPS27	P42677	84 aa	Known RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	RASSF2	P50749	326 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	PAX2	Q02962	417 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	MICB	Q29980	383 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	LINC01590	Q5TEZ4	76 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	LCN1P1	Q5VSP4	162 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	SLC16A9	Q7RTY1	509 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	PAPD5	Q8NDF8	572 aa	Known RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	C12orf43	Q96C57	262 aa	Known RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	NRBF2	Q96F24	287 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	DMRTB1	Q96MA1	342 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	NIPSNAP1	Q9BPW8	284 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	RTL8A	Q9BWD3	113 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	PAPOLG	Q9BWT3	736 aa	Known RBP	11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	OR51V1	Q9H2C8	321 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	NOX4	Q9NPH5	578 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	VNN3	Q9NY84	501 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	DNAJB9	Q9UBS3	223 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	ENOPH1	Q9UHY7	261 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	TMEM14A	Q9Y6G1	99 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	ANK2	Q01484	3957 aa		11.75	□□□□□ -0.53
TPM1-223	ENST00000560445	TMEM210	A6NLX4	147 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	PLAT	P00750	562 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	GRP	P07492	148 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	SLC2A1	P11166	492 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	OPRL1	P41146	370 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	ZNF121	P58317	390 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	RPS7	P62081	194 aa	Known RBP	11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	IL13RA1	P78552	427 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	GINS1	Q14691	196 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	PDCD1	Q15116	288 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	MPPED2	Q15777	294 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	TUSC1	Q2TAM9	212 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	KLF17	Q5JT82	389 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	METTL11B	Q5VVY1	283 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	KCTD18	Q6PI47	426 aa	Predicted RBP	11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	SHISA2	Q6UWI4	295 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	LYPD4	Q6UWN0	246 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	FAM57B	Q71RH2	274 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	SPATC1	Q76KD6	591 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	SLC36A1	Q7Z2H8	476 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	BOLL	Q8N9W6	283 aa	Known RBP	11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	OTOS	Q8NHW6	89 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	ZDHHC16	Q969W1	377 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	HIST1H2AA	Q96QV6	131 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	FAM53C	Q9NYF3	392 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	KAAG1	Q9UBP8	84 aa		11.74	□□□□□ -0.53
TPM1-223	ENST00000560445	hCG_38984	A0A1B0GV85	526 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	ACOD1	A6NK06	481 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	FAM183A	A6NL82	134 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	ZNF879	B4DU55	563 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	C3orf80	F5H4A9	247 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	CLU	P10909	449 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	GSK3A	P49840	483 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	PRSS12	P56730	875 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	PSMA6	P60900	246 aa	Known RBP	11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	FAM3A	P98173	230 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	KLHL12	Q53G59	568 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	AWAT1	Q58HT5	328 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	TEX36	Q5VZQ5	186 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	PLBD1	Q6P4A8	553 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	DEGS2	Q6QHC5	323 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	KRT77	Q7Z794	578 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	TIGD4	Q8IY51	512 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	CMTM4	Q8IZR5	234 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	GALNT4	Q8N4A0	578 aa		11.73	□□□□□ -0.53
TPM1-223	ENST00000560445	IQCF1	Q8N6M8	205 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms