RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 UPRTQ96BW1 309 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 SLC7A6OSQ96CW6 309 aaPredicted RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 ZMYND19Q96E35 227 aaPredicted RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 REEP6Q96HR9 211 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 NUDT16L1Q9BRJ7 211 aaKnown RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 YY1AP1Q9H869 796 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF556Q9HAH1 456 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 C14orf119Q9NWQ9 140 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 TCRBV3S1A0A5B6 114 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 ANKRD30BLA7E2S9 258 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 TNFRSF13BO14836 293 aaPredicted RBP17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 FKBP6O75344 327 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 GRPP07492 148 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 PRKACGP22612 351 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 NPY4RP50391 375 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF121P58317 390 aaPredicted RBP17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 CBX1P83916 185 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 PLBD1Q6P4A8 553 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 FAM57BQ71RH2 274 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 TRIM36Q9NQ86 728 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 C1orf123Q9NWV4 160 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 DNAJC27Q9NZQ0 273 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 DNAJB9Q9UBS3 223 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 POMPQ9Y244 141 aa17.04■□□□□ 0.32
CHRNA3-207ENST00000559941 hCG_38984A0A1B0GV85 526 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 PRODHO43272 600 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 NDUFA2O43678 99 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 LYNP07948 512 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 H2BFMP0C1H6 154 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 IGHV4-38-2P0DP08 117 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 CFL1P23528 166 aaKnown RBP17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 SFRP4Q6FHJ7 346 aaPredicted RBP17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF826PQ6ZT77 177 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 C9orf139Q6ZV77 190 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 GCSAMQ8N6F7 178 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF454Q8N9F8 522 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 BOLLQ8N9W6 283 aaKnown RBP17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 OTOSQ8NHW6 89 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF48Q96MX3 618 aaPredicted RBP17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 MS4A7Q9GZW8 240 aaPredicted RBP17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 OR10A2Q9H208 303 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF319Q9P2F9 582 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 ERVK-18Q9QC07 812 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 CTSZQ9UBR2 303 aa17.03■□□□□ 0.32
CHRNA3-207ENST00000559941 TRAV38-1A0A0B4J264 116 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 OOEPA6NGQ2 149 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 A6NLC8 198 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 C3orf80F5H4A9 247 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 SELENOFO60613 162 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 DNAJC8O75937 253 aaPredicted RBP17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 PLATP00750 562 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 LHBP01229 141 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 PRTN3P24158 256 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 OR8B8Q15620 311 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 KLHL12Q53G59 568 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 SLC35D3Q5M8T2 416 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 CPOQ8IVL8 374 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 OR8S1Q8NH09 359 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 THEM6Q8WUY1 208 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 PGAM5Q96HS1 289 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 MMADHCQ9H3L0 296 aaPredicted RBP17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 SLC25A19Q9HC21 320 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 BRD7Q9NPI1 651 aa17.02■□□□□ 0.32
CHRNA3-207ENST00000559941 C22orf46C9J442 243 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 GSK3AP49840 483 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 CD276Q5ZPR3 534 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 C11orf53Q8IXP5 236 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 CSNK2A3Q8NEV1 391 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 NRBF2Q96F24 287 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 TECTBQ96PL2 329 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 RGCCQ9H4X1 137 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 ZMAT3Q9HA38 289 aaKnown RBP17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 RNPEPL1Q9HAU8 725 aa17.01■□□□□ 0.31
CHRNA3-207ENST00000559941 IGHV3OR16-10A0A075B7F0 116 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 TRAV40A0A0B4J280 105 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 hCG_1807616A0A1W2PRN6 198 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 DNAJC9-AS1A6NH13 148 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 ADAM20O43506 726 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 ENSAO43768 121 aaKnown RBP17■□□□□ 0.31
CHRNA3-207ENST00000559941 SLC2A5P22732 501 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 MTNR1AP48039 350 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 BAMBIQ13145 260 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 SNCBQ16143 134 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 TEX36Q5VZQ5 186 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 TMEM236Q5W0B7 351 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 WDR86Q86TI4 376 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 BBS1Q8NFJ9 593 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 OR1M1Q8NGA1 313 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 DNAJC9Q8WXX5 260 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 C1orf147Q96MC9 270 aaPredicted RBP17■□□□□ 0.31
CHRNA3-207ENST00000559941 TEX12Q9BXU0 123 aa17■□□□□ 0.31
CHRNA3-207ENST00000559941 GSC2O15499 205 aa16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 TIPRLO75663 272 aa16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 GYPAP02724 150 aa16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 FGF12P61328 243 aa16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 RPS7P62081 194 aaKnown RBP16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 GFOD2Q3B7J2 385 aa16.99■□□□□ 0.31
CHRNA3-207ENST00000559941 FAM90A1Q86YD7 464 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms