RNA–Protein interactions for RNA: ENST00000559586.5

RABGGTA-210, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-210ENST00000559586 CA6P23280 308 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 DCTDP32321 178 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 CXCR4P61073 352 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 LMO4P61968 165 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 MAB21L1Q13394 359 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 TMED1Q13445 227 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 OCLNQ16625 522 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 AVPI1Q5T686 147 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 LPCAT4Q643R3 524 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 USP43Q70EL4 1123 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 ENTHD1Q8IYW4 607 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 SEMA6DQ8NFY4 1073 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 PGAM5Q96HS1 289 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 LYZL4Q96KX0 146 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 APOL4Q9BPW4 351 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 OR10A2Q9H208 303 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 NARFLQ9H6Q4 476 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 SP140LQ9H930 580 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 GCM1Q9NP62 436 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 MRPL15Q9P015 296 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 MRM2Q9UI43 246 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 WIPI2Q9Y4P8 454 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 GMPPBQ9Y5P6 360 aa16.86■□□□□ 0.29
RABGGTA-210ENST00000559586 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 GGT3PA6NGU5 568 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 FAM157AC9JC47 383 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 CLDN25C9JDP6 229 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 J3QRE1 110 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 PNPP00491 289 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 PEX2P28328 305 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 PMELP40967 661 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 COMPP49747 757 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 GSK3AP49840 483 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 ACTG1P63261 375 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 MVKQ03426 396 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 TIGD6Q17RP2 521 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 ZNF684Q5T5D7 378 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 FAHD2BQ6P2I3 314 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 RHOXF1Q8NHV9 184 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 FAHD2AQ96GK7 314 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 MROQ9BYG7 248 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 LPAR2Q9HBW0 351 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 TMEM106BQ9NUM4 274 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 PCDHB10Q9UN67 800 aa16.85■□□□□ 0.29
RABGGTA-210ENST00000559586 IGHV3-64DA0A0J9YX35 117 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 A0A1W2PQL4 384 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 ZNF670-ZNF695F2Z2N8 137 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 TRIM77I1YAP6 450 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 PTBP3O95758 552 aaKnown RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 IGLV3-1P01715 115 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 TNFRSF1AP19438 455 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 ACKR3P25106 362 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 CD200P41217 278 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 GATA4P43694 442 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 MMP16P51512 607 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 ELF3P78545 371 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 MFGE8Q08431 387 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 POU4F2Q12837 409 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 OR8B8Q15620 311 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 LRRC36Q1X8D7 754 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 GALNT4Q8N4A0 578 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 FAM216AQ8WUB2 273 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 DVL3Q92997 716 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 RFKQ969G6 155 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 PPP1R14AQ96A00 147 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 RAB39BQ96DA2 213 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 RDH12Q96NR8 316 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 TBX5Q99593 518 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 RGCCQ9H4X1 137 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 PPP1R3EQ9H7J1 279 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 SMPD3Q9NY59 655 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 IKZF2Q9UKS7 526 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 PPP1R3CQ9UQK1 317 aa16.84■□□□□ 0.29
RABGGTA-210ENST00000559586 TMEM269A0A1B0GVZ9 245 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 ACOD1A6NK06 481 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 CASQ2O14958 399 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 OR2T7P0C7T2 308 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 DDOSTP39656 456 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 MTNR1AP48039 350 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 RIDAP52758 137 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 EGR3Q06889 387 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 GFOD2Q3B7J2 385 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 MEDAGQ5VYS4 303 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 PLEKHG7Q6ZR37 379 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 CELF2-AS1Q8N7Q2 184 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 OR2T27Q8NH04 317 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 GCDHQ92947 438 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 RNF166Q96A37 237 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 SLC22A4Q9H015 551 aa16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.83■□□□□ 0.28
RABGGTA-210ENST00000559586 A0A0U1RQV5 110 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 ERICH4A6NGS2 130 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 PHYHO14832 338 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 SPRY1O43609 319 aaPredicted RBP16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 GMDSO60547 372 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 IGHV2-70P01814 119 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 CFL1P23528 166 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 HILS1P60008 231 aa16.82■□□□□ 0.28
RABGGTA-210ENST00000559586 ZNF85Q03923 595 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms