RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMEM106BQ9NUM4 274 aa15.78■□□□□ 0.12
CASC4-209ENST00000559222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.78■□□□□ 0.12
CASC4-209ENST00000559222 GTF2A1LQ9UNN4 478 aa15.78■□□□□ 0.12
CASC4-209ENST00000559222 SLC22A13Q9Y226 551 aa15.78■□□□□ 0.12
CASC4-209ENST00000559222 RHBDD3Q9Y3P4 386 aa15.78■□□□□ 0.12
CASC4-209ENST00000559222 FN1P02751 2386 aaKnown RBP15.78■□□□□ 0.12
CASC4-209ENST00000559222 LOC100289279A0A1B0GTE1 492 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 PHYHO14832 338 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 CD5LO43866 347 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 ZNF205O95201 554 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 CYB5R3P00387 301 aaPredicted RBP15.77■□□□□ 0.12
CASC4-209ENST00000559222 IGLV3-1P01715 115 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 GNAO1P09471 354 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 ATP6V1E1P36543 226 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 PSMB10P40306 273 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 TMEM33P57088 247 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 IL5RAQ01344 420 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 EGR3Q06889 387 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 FAM201AQ5SY85 155 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 WDR86Q86TI4 376 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 YIPF7Q8N8F6 280 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 ZNF540Q8NDQ6 660 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 OR51E1Q8TCB6 317 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 MSI2Q96DH6 328 aaKnown RBP15.77■□□□□ 0.12
CASC4-209ENST00000559222 OPA3Q9H6K4 179 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 SP140LQ9H930 580 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 ACOXLQ9NUZ1 547 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 MRPL15Q9P015 296 aaKnown RBP15.77■□□□□ 0.12
CASC4-209ENST00000559222 NUFIP1Q9UHK0 495 aaKnown RBP15.77■□□□□ 0.12
CASC4-209ENST00000559222 PPP1R3CQ9UQK1 317 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 EXOGQ9Y2C4 368 aaKnown RBP15.77■□□□□ 0.12
CASC4-209ENST00000559222 MYRFQ9Y2G1 1151 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 R4GMQ9 66 aa15.77■□□□□ 0.12
CASC4-209ENST00000559222 FAM157AC9JC47 383 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 INAFM1C9JVW0 142 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 LOC110117498-PIK3R3F6TDL0 507 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 H3BSH0 61 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 DCTDP32321 178 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 CD200P41217 278 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 CHN2P52757 468 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 ISL1P61371 349 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 LMO4P61968 165 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 SLC34A1Q06495 639 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 ZNF829Q3KNS6 432 aaPredicted RBP15.76■□□□□ 0.11
CASC4-209ENST00000559222 DMRTC1Q5HYR2 192 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 C6orf52Q5T4I8 152 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 LIPNQ5VXI9 398 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 FAM71F1Q96KD3 344 aaPredicted RBP15.76■□□□□ 0.11
CASC4-209ENST00000559222 ADI1Q9BV57 179 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 RNPEPL1Q9HAU8 725 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 GPR84Q9NQS5 396 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 UFSP2Q9NUQ7 469 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 OR52A1Q9UKL2 312 aa15.76■□□□□ 0.11
CASC4-209ENST00000559222 NSD1Q96L73 2696 aaPredicted RBP15.75■□□□□ 0.11
CASC4-209ENST00000559222 METTL15A6NJ78 407 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 C3orf80F5H4A9 247 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 IGHV2-70P01814 119 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 KRT8P05787 483 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 TNFRSF1AP19438 455 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 SRP9P49458 86 aaKnown RBP15.75■□□□□ 0.11
CASC4-209ENST00000559222 ODF4Q2M2E3 257 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 LAIR2Q6ISS4 152 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 DHRSXQ8N5I4 330 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 C19orf18Q8NEA5 215 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 RORBQ92753 470 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 ZNF649Q9BS31 505 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 PAPOLGQ9BWT3 736 aaKnown RBP15.75■□□□□ 0.11
CASC4-209ENST00000559222 YAE1D1Q9NRH1 226 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 GNG8Q9UK08 70 aa15.75■□□□□ 0.11
CASC4-209ENST00000559222 A0A0U1RQV5 110 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 A0A1B0GTI1 187 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 ISPDA4D126 451 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 TMEM178BH3BS89 294 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 P2RY10O00398 339 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 MPZL2O60487 215 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 FAM20BO75063 409 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 CAPGP40121 348 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 KIR3DL2P43630 455 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 OR12D2P58182 307 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 ZMYND11Q15326 602 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 BCL2L15Q5TBC7 163 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 ZNF826PQ6ZT77 177 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 CATSPERDQ86XM0 798 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 ELMOD2Q8IZ81 293 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 PRSS35Q8N3Z0 413 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 OR52I1Q8NGK6 324 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 RGCCQ9H4X1 137 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 C8orf4Q9NR00 106 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 NPTNQ9Y639 398 aa15.74■□□□□ 0.11
CASC4-209ENST00000559222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.73■□□□□ 0.11
CASC4-209ENST00000559222 DAPL1A0PJW8 107 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 ACOD1A6NK06 481 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 ANKRD30BLA7E2S9 258 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 ZNF850A8MQ14 1090 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 GMDSO60547 372 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 LMX1BO60663 402 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 CFL1P23528 166 aaKnown RBP15.73■□□□□ 0.11
CASC4-209ENST00000559222 DDOSTP39656 456 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 GATA4P43694 442 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 AQP4P55087 323 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms