RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 OR2AG1Q9H205 316 aa2.74□□□□□ -1.97
CASC4-206ENST00000558847 OR52D1Q9H346 318 aa2.74□□□□□ -1.97
CASC4-206ENST00000558847 ZNF430Q9H8G1 570 aaPredicted RBP2.74□□□□□ -1.97
CASC4-206ENST00000558847 EXOSC4Q9NPD3 245 aaKnown RBP2.74□□□□□ -1.97
CASC4-206ENST00000558847 ZDHHC4Q9NPG8 344 aa2.74□□□□□ -1.97
CASC4-206ENST00000558847 RHBDL2Q9NX52 303 aa2.74□□□□□ -1.97
CASC4-206ENST00000558847 TET2Q6N021 2002 aaPredicted RBP2.74□□□□□ -1.97
CASC4-206ENST00000558847 KRBOX1C9JBD0 128 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 H7C2Y5 167 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 MYL12BO14950 172 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 GATCO43716 136 aaKnown RBP2.73□□□□□ -1.97
CASC4-206ENST00000558847 NMT2O60551 498 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 CTNSO60931 367 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 PLEKHA8P1O95397 391 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 TTC4O95801 387 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 GCGP01275 180 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 IGHV3-11P01762 117 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 IVLP07476 585 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 RHOXF2BP0C7M4 288 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 APLNRP35414 380 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ARR3P36575 388 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 CXCL12P48061 93 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ST3GAL4Q11206 333 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 EBI3Q14213 229 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 VAMP3Q15836 100 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ATP6V1FQ16864 119 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 CD300LGQ6UXG3 332 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ARRDC1Q8N5I2 433 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 OR4K5Q8NGD3 323 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 OR1S1Q8NH92 325 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ENKURQ8TC29 256 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 RXFP4Q8TDU9 374 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 FRZBQ92765 325 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 DYNLL2Q96FJ2 89 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 ZNF488Q96MN9 340 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 RDH12Q96NR8 316 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 RHOXF2Q9BQY4 288 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 NAA50Q9GZZ1 169 aaKnown RBP2.73□□□□□ -1.97
CASC4-206ENST00000558847 XKR8Q9H6D3 395 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 C6orf50Q9HD87 102 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 CFL2Q9Y281 166 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 OR51B2Q9Y5P1 312 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 KPTNQ9Y664 436 aa2.73□□□□□ -1.97
CASC4-206ENST00000558847 GPATCH8Q9UKJ3 1502 aaKnown RBP2.73□□□□□ -1.97
CASC4-206ENST00000558847 PCDH11XQ9BZA7 1347 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 IGHV7-4-1A0A0J9YVY3 117 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 LOC100653049A0A140TA62 436 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 RSPH10B2B2RC85 870 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 DFFAO00273 331 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 POLR1CO15160 346 aaPredicted RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 ZNF324O75467 553 aaPredicted RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 GATBO75879 557 aaKnown RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 KRT34O76011 436 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 GLSO94925 669 aaPredicted RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 MRPL3P09001 348 aaKnown RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 TPM1P09493 284 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 RSPH10BP0C881 870 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 GABRG2P18507 467 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 OPRK1P41145 380 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 NDUFA8P51970 172 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SLC35B1P78383 322 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 PIGHQ14442 188 aaPredicted RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 RBMY1FQ15415 496 aaKnown RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 OR1Q1Q15612 314 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 ZNF691Q5VV52 312 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 MFSD14CQ5VZR4 134 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 GUSBP11Q6P575 273 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 TMEM205Q6UW68 189 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 DAW1Q8N136 415 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 ASCC1Q8N9N2 400 aaKnown RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 WDR31Q8NA23 367 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 GPR26Q8NDV2 337 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 OR6N1Q8NGY5 312 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 OR8D1Q8WZ84 308 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 LRRC39Q96DD0 335 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 TSNAXQ99598 290 aaKnown RBP2.72□□□□□ -1.97
CASC4-206ENST00000558847 DOK1Q99704 481 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SPIN2AQ99865 258 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SPIN2BQ9BPZ2 258 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 KCNS3Q9BQ31 491 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SULT4A1Q9BR01 284 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SFXN3Q9BWM7 321 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 SAMD10Q9BYL1 202 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 VCX3AQ9NNX9 186 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 ZNF257Q9Y2Q1 563 aa2.72□□□□□ -1.97
CASC4-206ENST00000558847 A0A0B4J2E0 115 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 CENPVL3A0A0U1RRI6 287 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 FAM25EA8MYX2 175 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 NDUFS8O00217 210 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 OXTP01178 125 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 CD74P04233 296 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 RHOCP08134 193 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 ADRA2AP08913 450 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 SLC35G6P0C7Q6 338 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 HSPD1P10809 573 aaKnown RBP2.71□□□□□ -1.98
CASC4-206ENST00000558847 NPY1RP25929 384 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 GGT2P36268 569 aa2.71□□□□□ -1.98
CASC4-206ENST00000558847 TAS2R31P59538 309 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms