RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 NAAAQ02083 359 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 RPL7L1Q6DKI1 246 aaKnown RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 ABHD12BQ7Z5M8 362 aaPredicted RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 OR5D18Q8NGL1 313 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 GLYATL2Q8WU03 294 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 DAZLQ92904 295 aaKnown RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 NRIP2Q9BQI9 281 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 BIN3Q9NQY0 253 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 ZNF319Q9P2F9 582 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 SUSD2Q9UGT4 822 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 CNTRLQ7Z7A1 2325 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 TLCD2A6NGC4 264 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 ADAM10O14672 748 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 CDC14BO60729 498 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 FBXO24O75426 580 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 SFTPBP07988 381 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 HIST1H1DP16402 221 aaKnown RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 LPAR6P43657 344 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 FASLGP48023 281 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 MFAP5Q13361 173 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 ARFRP1Q13795 201 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 PNLIPRP3Q17RR3 467 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 PRSS54Q6PEW0 395 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 DEGS2Q6QHC5 323 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 Q6ZS52 159 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 GALNTL5Q7Z4T8 443 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 OR1N1Q8NGS0 311 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 OR13G1Q8NGZ3 307 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 GPER1Q99527 375 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 PARP12Q9H0J9 701 aaKnown RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 RCC2Q9P258 522 aaKnown RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 BRWD1Q9NSI6 2320 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 METTL12A8MUP2 240 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 C9JQL5 133 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 TO15178 435 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 MED6O75586 246 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 KNG1P01042 644 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 HCKP08631 526 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 SFTA3P0C7M3 94 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 CBX5P45973 191 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 DHPSP49366 369 aaPredicted RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 B2MP61769 119 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 AVPI1Q5T686 147 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 CARD17Q5XLA6 110 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 OR5AS1Q8N127 324 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 OR1L3Q8NH93 324 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 NPRL2Q8WTW4 380 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 C1orf147Q96MC9 270 aaPredicted RBP10.08□□□□□ -0.8
SRP54-213ENST00000556994 TMEM59Q9BXS4 323 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 VN1R1Q9GZP7 353 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 SLC5A7Q9GZV3 580 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 POLR1DQ9Y2S0 133 aa10.08□□□□□ -0.8
SRP54-213ENST00000556994 A0A1W2PPC4 97 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 RNASEK-C17orf49H0YIS7 233 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 H3BMH7 237 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 AMY2BP19961 511 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 TBPP20226 339 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 AADACL3Q5VUY0 350 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 OR2A2Q6IF42 318 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 IL34Q6ZMJ4 242 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 PNLDC1Q8NA58 520 aaKnown RBP10.07□□□□□ -0.8
SRP54-213ENST00000556994 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ADAMTS17Q8TE56 1095 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
SRP54-213ENST00000556994 CRB3Q9BUF7 120 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 IFT22Q9H7X7 185 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ZNF304Q9HCX3 659 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 CHST11Q9NPF2 352 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 GPR84Q9NQS5 396 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 SLC22A11Q9NSA0 550 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 CLEC1BQ9P126 229 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ATPIF1Q9UII2 106 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 MMP17Q9ULZ9 603 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 LHFPL6Q9Y693 200 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 MYO7BQ6PIF6 2116 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 CSTBP04080 98 aaKnown RBP10.07□□□□□ -0.8
SRP54-213ENST00000556994 CHRM2P08172 466 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 GIMD1P0DJR0 217 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 FBLP22087 321 aaKnown RBP10.07□□□□□ -0.8
SRP54-213ENST00000556994 CD80P33681 288 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 OR3A2P47893 321 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ARL4DP49703 201 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 MEOX2P50222 304 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 CAV2P51636 162 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 ZNF529Q6P280 563 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 NAA40Q86UY6 237 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 OR8B12Q8NGG6 310 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 TPSD1Q9BZJ3 242 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 SLC26A1Q9H2B4 701 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 GPR27Q9NS67 375 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 SRPK3Q9UPE1 567 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 PCDHGA1Q9Y5H4 931 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 FER1L5A0AVI2 2057 aa10.07□□□□□ -0.8
SRP54-213ENST00000556994 C5orf63A6NC05 138 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms