RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OR2T4Q8NH00 348 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 EGLN3Q9H6Z9 239 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 CNTD2Q9H8S5 307 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 TCF7L1Q9HCS4 588 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 DUX4Q9UBX2 424 aa15.07■□□□□ 0
VIPAS39-209ENST00000556909 A0A1B0GVI7 797 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 SPARCP09486 303 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 RRM2P31350 389 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 PRKXP51817 358 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 ELF3P78545 371 aaPredicted RBP15.06■□□□□ 0
VIPAS39-209ENST00000556909 PGBD2Q6P3X8 592 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 C11orf53Q8IXP5 236 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 ZSCAN4Q8NAM6 433 aaPredicted RBP15.06■□□□□ 0
VIPAS39-209ENST00000556909 OR51L1Q8NGJ5 315 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 GNPDA2Q8TDQ7 276 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 LRRC29Q8WV35 223 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 LRTOMTQ8WZ04 291 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 SLAMF6Q96DU3 332 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 KCNJ15Q99712 375 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 SEMA6AQ9H2E6 1030 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 DPAGT1Q9H3H5 408 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 CDH10Q9Y6N8 788 aa15.06■□□□□ 0
VIPAS39-209ENST00000556909 XRCC2O43543 280 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 WDR38Q5JTN6 314 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 DHRS7BQ6IAN0 325 aaPredicted RBP15.05■□□□□ -0
VIPAS39-209ENST00000556909 METAP1DQ6UB28 335 aaPredicted RBP15.05■□□□□ -0
VIPAS39-209ENST00000556909 C1QL4Q86Z23 238 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 FAM216BQ8N7L0 139 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 LY6G5BQ8NDX9 201 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 OR52L1Q8NGH7 329 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 OR8S1Q8NH09 359 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 SPSB4Q96A44 273 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 CMTM5Q96DZ9 223 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 CCL13Q99616 98 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 C16orf95Q9H693 158 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 RNPEPL1Q9HAU8 725 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 ZNRD1Q9P1U0 126 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 ONECUT1Q9UBC0 465 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 FAM96BQ9Y3D0 163 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 N6AMT1Q9Y5N5 214 aa15.05■□□□□ -0
VIPAS39-209ENST00000556909 ANKRD30BLA7E2S9 258 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 ZNF878C9JN71 531 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.04■□□□□ -0
VIPAS39-209ENST00000556909 FABP3P05413 133 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 FBP1P09467 338 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 MUC1P15941 1255 aaPredicted RBP15.04■□□□□ -0
VIPAS39-209ENST00000556909 ENTPD1P49961 510 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 CSNK2BP67870 215 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 PRB3Q04118 309 aaPredicted RBP15.04■□□□□ -0
VIPAS39-209ENST00000556909 TAF13Q15543 124 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 MICBQ29980 383 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 RPL13AP3Q6NVV1 102 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 WDR82Q6UXN9 313 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 SLC37A3Q8NCC5 494 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 OR9Q1Q8NGQ5 310 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 MCUR1Q96AQ8 359 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 SIRT7Q9NRC8 400 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 CENPMQ9NSP4 180 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 MAGEL2Q9UJ55 1249 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
VIPAS39-209ENST00000556909 GRK5P34947 590 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 DDOSTP39656 456 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 FAM3AP98173 230 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 SLC16A9Q7RTY1 509 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 DPY19L4Q7Z388 723 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 ZNF511Q8NB15 262 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 OR1M1Q8NGA1 313 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 OR9Q2Q8NGE9 314 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 OR8D4Q8NGM9 314 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 SEH1LQ96EE3 360 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 MYLK2Q9H1R3 596 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 CD300AQ9UGN4 299 aa15.03■□□□□ -0
VIPAS39-209ENST00000556909 CAB39Q9Y376 341 aaPredicted RBP15.03■□□□□ -0
VIPAS39-209ENST00000556909 BTBD17A6NE02 478 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 RNASEK-C17orf49H0YIS7 233 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 ACOT8O14734 319 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 TBX1O43435 398 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 GYPBP06028 91 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 FMO3P31513 532 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 CX3CR1P49238 355 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 DLX1P56177 255 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 CRMP1Q14194 572 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 TIGD6Q17RP2 521 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 C2orf68Q2NKX9 166 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 SLC36A1Q7Z2H8 476 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 CMTM4Q8IZR5 234 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 FAM110DQ8TAY7 271 aaPredicted RBP15.02■□□□□ -0
VIPAS39-209ENST00000556909 NPRL2Q8WTW4 380 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 C12orf43Q96C57 262 aaKnown RBP15.02■□□□□ -0
VIPAS39-209ENST00000556909 REEP6Q96HR9 211 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 DMRTB1Q96MA1 342 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 PPP1R3EQ9H7J1 279 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 IL1RAPQ9NPH3 570 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 IL20Q9NYY1 176 aa15.02■□□□□ -0
VIPAS39-209ENST00000556909 PRPF19Q9UMS4 504 aaKnown RBP15.02■□□□□ -0
VIPAS39-209ENST00000556909 hCG_38984A0A1B0GV85 526 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 DHRS12A0PJE2 317 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF593O00488 134 aaPredicted RBP15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 NPFFO15130 113 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms