RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ONECUT1Q9UBC0 465 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 CD300AQ9UGN4 299 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 B9D1Q9UPM9 204 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 TET2Q6N021 2002 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-221ENST00000556571 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
ACTN1-221ENST00000556571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-221ENST00000556571 hCG_1807616A0A1W2PRN6 198 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 GGT3PA6NGU5 568 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 A6NLC8 198 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 NPFFO15130 113 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 H1F0P07305 194 aaKnown RBP9.75□□□□□ -0.85
ACTN1-221ENST00000556571 GRPP07492 148 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 MUC1P15941 1255 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-221ENST00000556571 LOXL3P58215 753 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 SMIM11AP58511 58 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 POU4F2Q12837 409 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 MICBQ29980 383 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 ZNF826PQ6ZT77 177 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 LINC00346Q8IVM7 164 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 OR6V1Q8N148 313 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 SLC7A13Q8TCU3 470 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 SPTSSAQ969W0 71 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 RSRC1Q96IZ7 334 aaKnown RBP9.75□□□□□ -0.85
ACTN1-221ENST00000556571 PPA2Q9H2U2 334 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 MUC13Q9H3R2 512 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 SIRT7Q9NRC8 400 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 C14orf119Q9NWQ9 140 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 NDUFAF4Q9P032 175 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 CYB5R1Q9UHQ9 305 aa9.75□□□□□ -0.85
ACTN1-221ENST00000556571 PRPF19Q9UMS4 504 aaKnown RBP9.75□□□□□ -0.85
ACTN1-221ENST00000556571 A0A1W2PRQ8 180 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 M0R135 149 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 RENP00797 406 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 FABP3P05413 133 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 GRK5P34947 590 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 KIR2DS4P43632 304 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 EFNB2P52799 333 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 FXYD6P3P58550 94 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 ZNF92Q03936 586 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 DGCR6Q14129 220 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 SLC36A1Q7Z2H8 476 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 DHFR2Q86XF0 187 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 FAM86B1Q8N7N1 296 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 CFHR4Q92496 578 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 ZNF799Q96GE5 643 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 LRGUKQ96M69 825 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 ERMAPQ96PL5 475 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-221ENST00000556571 CCL13Q99616 98 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 RNPEPL1Q9HAU8 725 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 PNRC2Q9NPJ4 139 aaKnown RBP9.74□□□□□ -0.85
ACTN1-221ENST00000556571 ACTR3BQ9P1U1 418 aa9.74□□□□□ -0.85
ACTN1-221ENST00000556571 IGHV3OR15-7A0A075B7D8 119 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 MEIOCA2RUB1 952 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 UNC119BA6NIH7 251 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 BHLHE40O14503 412 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 GYG2O15488 501 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 XPNPEP2O43895 674 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 OMPP47874 163 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 UBE2E1P51965 193 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 SPIBQ01892 262 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 RFX4Q33E94 735 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 SNAI3Q3KNW1 292 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 DNAL1Q4LDG9 190 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 SMARCD3Q6STE5 483 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 CYP2R1Q6VVX0 501 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 C1orf122Q6ZSJ8 110 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 ZBTB46Q86UZ6 589 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 FGFRL1Q8N441 504 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 DTX3Q8N9I9 347 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 OR4C13Q8NGP0 309 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 OR2AE1Q8NHA4 323 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 CCDC124Q96CT7 223 aaKnown RBP9.73□□□□□ -0.85
ACTN1-221ENST00000556571 NMNAT3Q96T66 252 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 FAM234AQ9H0X4 552 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 C1orf21Q9H246 121 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.73□□□□□ -0.85
ACTN1-221ENST00000556571 NECAP2Q9NVZ3 263 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 KCNG2Q9UJ96 466 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 SIGLEC9Q9Y336 463 aa9.73□□□□□ -0.85
ACTN1-221ENST00000556571 A0A1B0GW55 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 A0A1W2PRD5 423 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 A0A1W2PRF3 423 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 A0A1W2PRM7 423 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 ARPC3O15145 178 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 NDUFB3O43676 98 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DIRAS1O95057 198 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 GADD45GO95257 159 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L2P0CJ85 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L3P0CJ86 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L4P0CJ87 422 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L5P0CJ88 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L6P0CJ89 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 DUX4L7P0CJ90 424 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 T-ENOLP0DO92 83 aa9.72□□□□□ -0.85
ACTN1-221ENST00000556571 OTX1P32242 354 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-221ENST00000556571 SAA4P35542 130 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms