RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OR51B6Q9H340 312 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 ANKRD30BLA7E2S9 258 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 CST4P01036 141 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 HPNP05981 417 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 RNF212Q495C1 297 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 PDZD11Q5EBL8 140 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 C1QL3Q5VWW1 255 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 SSX3Q99909 188 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 UQCC1Q9NVA1 299 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 RASL12Q9NYN1 266 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 FOXF1Q12946 379 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 NHLRC3Q5JS37 347 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 C9orf135Q5VTT2 229 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF660Q6AZW8 331 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 BATF2Q8N1L9 274 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF611Q8N823 705 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 MMP17Q9ULZ9 603 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 GREB1Q4ZG55 1949 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 A0A0U1RQK1 487 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZFP92A6NM28 416 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 H7C1Q1 480 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 ADAP1O75689 374 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 CRHP06850 196 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 GUSBP08236 651 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 JMJD7P0C870 316 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 NQO2P16083 231 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 GLRA1P23415 457 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 AADACL3Q5VUY0 350 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 PRSS54Q6PEW0 395 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMPPEQ6ZT21 453 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 RTN4IP1Q8WWV3 396 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 PLA2G2FQ9BZM2 168 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 STRADBQ9C0K7 418 aa13.46□□□□□ -0.25
ARHGEF40-207ENST00000556399 SIGLEC5O15389 551 aa13.46□□□□□ -0.26
ARHGEF40-207ENST00000556399 RBP2P50120 134 aa13.46□□□□□ -0.26
ARHGEF40-207ENST00000556399 SIGLEC14Q08ET2 396 aa13.46□□□□□ -0.26
ARHGEF40-207ENST00000556399 MVB12AQ96EY5 273 aa13.46□□□□□ -0.26
ARHGEF40-207ENST00000556399 PRRX2Q99811 253 aa13.46□□□□□ -0.26
ARHGEF40-207ENST00000556399 SPTY2D1-AS1A0A0U1RR47 76 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ABCD3P28288 659 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 MEOX2P50222 304 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 SHEQ5VZ18 495 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZFP62Q8NB50 900 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 LOC105371267A0A1B0GV96 52 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 M0R135 149 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 PIN1P1O15428 100 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 RECKO95980 971 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 RAB11AP62491 216 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 RAB1AP62820 205 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 HNF4GQ14541 408 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 MIDNQ504T8 468 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAHD2BQ6P2I3 314 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 SLC25A42Q86VD7 318 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ATOH1Q92858 354 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF799Q96GE5 643 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAHD2AQ96GK7 314 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 KLF15Q9UIH9 416 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 SERPINE3A8MV23 424 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 NME1P15531 152 aaKnown RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 DEGS2Q6QHC5 323 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 TNFSF14O43557 240 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 GUK1Q16774 197 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 KISS1RQ969F8 398 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 ALX4Q9H161 411 aaPredicted RBP13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 GHRLQ9UBU3 117 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 TNFSF18Q9UNG2 199 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
ARHGEF40-207ENST00000556399 THY1P04216 161 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 DVL1P1P54792 670 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZNF239Q16600 458 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 TMEM268Q5VZI3 342 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 SSX9Q7RTT3 188 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 MAML2Q8IZL2 1156 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 OR1J1Q8NGS3 322 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 ASB5Q8WWX0 329 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 KCNE5Q9UJ90 142 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 HSD17B6O14756 317 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 IGKV1D-16P01601 117 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 ADRA2CP18825 462 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 FOLR3P41439 243 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 ZP1P60852 638 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 NKAIN1Q4KMZ8 207 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 MRPL41Q8IXM3 137 aaKnown RBP13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 ANKRD36A6QL64 1941 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 FAHP16930 419 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 CD27P26842 260 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 GDF1P27539 372 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 LIPHQ8WWY8 451 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 SOSTQ9BQB4 213 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
ARHGEF40-207ENST00000556399 A0A087WZY1 265 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms