RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-205ENST00000556096 RAB22AQ9UL26 194 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 DNAJC13O75165 2243 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 CACNA1GO43497 2377 aa12.83□□□□□ -0.36
VPS33B-205ENST00000556096 GSTT2BP0CG30 244 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 PRF1P14222 555 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 OR3A2P47893 321 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 SRP9P49458 86 aaKnown RBP12.82□□□□□ -0.36
VPS33B-205ENST00000556096 HGFACQ04756 655 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 LY6DQ14210 128 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 AGAP6Q5VW22 663 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 Q6ZS92 163 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 P4HA3Q7Z4N8 544 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 DPPA2Q7Z7J5 298 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 NKX3-1Q99801 234 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-205ENST00000556096 MARVELD1Q9BSK0 173 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 ATG5Q9H1Y0 275 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 KCNK15Q9H427 330 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 RGCCQ9H4X1 137 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 AUNIPQ9H7T9 357 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 NLKQ9UBE8 527 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 PIEZO2Q9H5I5 2752 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 MEIOCA2RUB1 952 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 MKRN2OSH3BPM6 223 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 LCATP04180 440 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 MPGP29372 298 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 ARR3P36575 388 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 FOXG1P55316 489 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-205ENST00000556096 AP3S2P59780 193 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 QRFPP83859 136 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 PLA1AQ53H76 456 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 RNASE12Q5GAN4 147 aaKnown RBP12.82□□□□□ -0.36
VPS33B-205ENST00000556096 FBXW9Q5XUX1 488 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 PRSS50Q9UI38 385 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
VPS33B-205ENST00000556096 IGKV1-9A0A0C4DH69 117 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 BTCP35070 178 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 RPUSD3Q6P087 351 aaKnown RBP12.81□□□□□ -0.36
VPS33B-205ENST00000556096 ANGPTL5Q86XS5 388 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 CPEB3Q8NE35 698 aaKnown RBP12.81□□□□□ -0.36
VPS33B-205ENST00000556096 SEMA6DQ8NFY4 1073 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 REEP6Q96HR9 211 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 TAAR6Q96RI8 345 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 C1QTNF5Q9BXJ0 243 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 CHST5Q9GZS9 411 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 RALYQ9UKM9 306 aaKnown RBP12.81□□□□□ -0.36
VPS33B-205ENST00000556096 PIGLQ9Y2B2 252 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 TP53TG5Q9Y2B4 290 aa12.81□□□□□ -0.36
VPS33B-205ENST00000556096 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 TRAV18A0A075B6X5 111 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 A0A096LPE4 126 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 OR14I1A6ND48 311 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 WISP2O76076 250 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 KDM4BO94953 1096 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 HCKP08631 526 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 SNTB2Q13425 540 aaKnown RBP12.8□□□□□ -0.36
VPS33B-205ENST00000556096 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 RAB12Q6IQ22 244 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 TMEM53Q6P2H8 277 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 PCSK4Q6UW60 755 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 COLCA1Q6ZS62 124 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 OR2W3Q7Z3T1 314 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 PAQR4Q8N4S7 273 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-205ENST00000556096 GCDHQ92947 438 aaPredicted RBP12.8□□□□□ -0.36
VPS33B-205ENST00000556096 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 DPAGT1Q9H3H5 408 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 COPZ2Q9P299 210 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
VPS33B-205ENST00000556096 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
VPS33B-205ENST00000556096 ANKRD20A5PA0PJZ0 165 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 TMEM14DPA8MWL7 114 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 AHRRA9YTQ3 701 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 H7C417 338 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 SULT1C2O00338 296 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 XRCC2O43543 280 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 SCGNO76038 276 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 IL18BPO95998 194 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 UBBP0CG47 229 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 VSIG8P0DPA2 414 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 FAHP16930 419 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 BTG1P62324 171 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 RIPPLY1Q0D2K3 151 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 RSBN1Q5VWQ0 802 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-205ENST00000556096 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 RBMXL3Q8N7X1 1067 aaKnown RBP12.79□□□□□ -0.36
VPS33B-205ENST00000556096 OR1K1Q8NGR3 316 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS33B-205ENST00000556096 WNT2BQ93097 391 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 SPSB4Q96A44 273 aa12.79□□□□□ -0.36
VPS33B-205ENST00000556096 TRIB1Q96RU8 372 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms