RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TMEM123Q8N131 208 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 PRSS35Q8N3Z0 413 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 TMEM251Q8N6I4 163 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF433Q8N7K0 673 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 RBMXL3Q8N7X1 1067 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 SAMD12Q8N8I0 201 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 POC5Q8NA72 575 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 OR10D3Q8NH80 312 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF671Q8TAW3 534 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 SETD6Q8TBK2 473 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 TRMT10AQ8TBZ6 339 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 TSEN15Q8WW01 171 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 SNRNP40Q96DI7 357 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ADGRG7Q96K78 797 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 CMTM3Q96MX0 182 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 RBM24Q9BX46 236 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 SRXN1Q9BYN0 137 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 PRRG4Q9BZD6 226 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ULBP2Q9BZM5 246 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 SP140LQ9H930 580 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ACKR4Q9NPB9 350 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 POLE4Q9NR33 117 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 FAIMQ9NVQ4 179 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 TBCCD1Q9NVR7 557 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 RABL2AQ9UBK7 228 aaPredicted RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 CKLFQ9UBR5 152 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 OR52A1Q9UKL2 312 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 HHLA2Q9UM44 414 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 RABL2BQ9UNT1 228 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 DHDHQ9UQ10 334 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 AK6Q9Y3D8 172 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 V9GY05 133 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 V9GYH0 126 aa5.98□□□□□ -1.45
SLIRP-204ENST00000555890 ANK3Q12955 4377 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 PHF3Q92576 2039 aaKnown RBP5.98□□□□□ -1.45
SLIRP-204ENST00000555890 MED12Q93074 2177 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 TRBV5-7A0A0A0MS05 114 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 A0A1B0GTH9 108 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ANXA2P2A6NMY6 339 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF878C9JN71 531 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PIN1P1O15428 100 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PSPNO60542 156 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 CYTIPO60759 359 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PFDN1O60925 122 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 GLSO94925 669 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PTTG1O95997 202 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PNPP00491 289 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 APOC1P02654 83 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ISG15P05161 165 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ANXA2P07355 339 aaKnown RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 UBCP0CG48 685 aaKnown RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 CALCBP10092 127 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SLC2A2P11168 524 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PSKH1P11801 424 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF708P17019 499 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ELK1P19419 428 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 NPR2P20594 1047 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ACHEP22303 614 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 RFC3P40938 356 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 MAGEA5P43359 124 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 RANBP1P43487 201 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SOX2P48431 317 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 INPP1P49441 399 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 OR10A3P58181 314 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 GRB2P62993 217 aaKnown RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 PITPNAQ00169 270 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 IFITM3Q01628 133 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 IL18Q14116 193 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ODF4Q2M2E3 257 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SLC25A35Q3KQZ1 300 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 CEP78Q5JTW2 689 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 OTPQ5XKR4 325 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ABLIM2Q6H8Q1 611 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 CORO6Q6QEF8 472 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 TEPPQ6URK8 271 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 STAC2Q6ZMT1 411 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 FCRLAQ7L513 359 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 LUZP2Q86TE4 346 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SNX29P2Q8IUI4 249 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 WDFY1Q8IWB7 410 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 GPR137CQ8N3F9 429 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 FAM109AQ8N4B1 249 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZIC4Q8N9L1 334 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZFP62Q8NB50 900 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 NAXEQ8NCW5 288 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 GJC3Q8NFK1 279 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ROBO4Q8WZ75 1007 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 RGP1Q92546 391 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ABTB1Q969K4 478 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 TMEM106AQ96A25 262 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SCMH1Q96GD3 660 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF385AQ96PM9 386 aaKnown RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 HES7Q9BYE0 225 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 SRRQ9GZT4 340 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 LDAHQ9H6V9 325 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 ZNF552Q9H707 407 aaPredicted RBP5.97□□□□□ -1.45
SLIRP-204ENST00000555890 EXO5Q9H790 373 aa5.97□□□□□ -1.45
SLIRP-204ENST00000555890 MOB1AQ9H8S9 216 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms