RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PDCL2Q8N4E4 241 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 ASCC1Q8N9N2 400 aaKnown RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 OR1J4Q8NGS1 313 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 RXFP4Q8TDU9 374 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 RXFP2Q8WXD0 754 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 CACNG8Q8WXS5 425 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 FRZBQ92765 325 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 RERGQ96A58 199 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 RCN3Q96D15 328 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 NARS2Q96I59 477 aaKnown RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 OSBPL11Q9BXB4 747 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 TDRD3Q9H7E2 651 aaKnown RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 SIRT7Q9NRC8 400 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 C8orf17Q9NRJ1 99 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 IFNKQ9P0W0 207 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF282Q9UDV7 671 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 FARSAQ9Y285 508 aaKnown RBP1.86□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM14AQ9Y6G1 99 aa1.86□□□□□ -2.11
SCFD1-213ENST00000554776 A0A0B4J2E0 115 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 SOCS1O15524 211 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 CHST10O43529 356 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 GMDSO60547 372 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 CTNSO60931 367 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 GLSO94925 669 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-213ENST00000554776 SMC2O95347 1197 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 ETHE1O95571 254 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 GCGP01275 180 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 IGLV3-25P01717 112 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 HLA-DQA1P01909 254 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 HLA-DQB1P01920 261 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 NUP62P37198 522 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-213ENST00000554776 OR1Q1Q15612 314 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 HNRNPA1L2Q32P51 320 aaKnown RBP1.85□□□□□ -2.11
SCFD1-213ENST00000554776 NDUFAF6Q330K2 333 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 NKAIN1Q4KMZ8 207 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 Q5W150 140 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 KDM4DQ6B0I6 523 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 FAM71E1Q6IPT2 247 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 ZFP1Q6P2D0 407 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 OPN5Q6U736 354 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 RTL4Q6ZR62 310 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 TTLQ8NG68 377 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 ESR2Q92731 530 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 CDS1Q92903 461 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM159Q96B96 161 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 L3HYPDHQ96EM0 354 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 LZTS2Q9BRK4 669 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 GAL3ST2Q9H3Q3 398 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 ARMC7Q9H6L4 198 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 KIR3DX1Q9H7L2 352 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 FBXO6Q9NRD1 293 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-213ENST00000554776 CES1P1Q9UKY3 287 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF257Q9Y2Q1 563 aa1.85□□□□□ -2.11
SCFD1-213ENST00000554776 BZW2Q9Y6E2 419 aaKnown RBP1.85□□□□□ -2.11
SCFD1-213ENST00000554776 DOCK8Q8NF50 2099 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 DOCK9Q9BZ29 2069 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 A0A0A6YYD5 115 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 A0A1W2PRF3 423 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 A0A1W2PRM7 423 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OR5H1A6NKK0 313 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 K7EN84 100 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 M0R1X1 148 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 DFFAO00273 331 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 TNFRSF11BO00300 401 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 BPY2O14599 106 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 KDELR3O43731 214 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 RAD1O60671 282 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 PLEKHA8P1O95397 391 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 LCA5LO95447 670 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 TRBV12-3P01733 135 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 CD9P21926 228 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 HTR1DP28221 377 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ARL2P36404 184 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OPRK1P41145 380 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 CSKP41240 450 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OR2B8PP59922 312 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 SIGLEC14Q08ET2 396 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 IFFO1Q0D2I5 559 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 SHHQ15465 462 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 C6orf99Q4VX62 202 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ABCA11PQ4W5N1 156 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 HSP90AA4PQ58FG1 418 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 RNASE13Q5GAN3 156 aaKnown RBP1.84□□□□□ -2.11
SCFD1-213ENST00000554776 TMEM236Q5W0B7 351 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 CD300LGQ6UXG3 332 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 SLC35D2Q76EJ3 337 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 NDUFAF7Q7L592 441 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 MDP1Q86V88 176 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 UBAC2Q8NBM4 344 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 OR10G6Q8NH81 332 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 LILRB4Q8NHJ6 448 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 ZNF461Q8TAF7 563 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 NDNFQ8TB73 568 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 LRRC39Q96DD0 335 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 RNF170Q96K19 258 aa1.84□□□□□ -2.11
SCFD1-213ENST00000554776 KCNS1Q96KK3 526 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms