RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 OR51B6Q9H340 312 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 HRH4Q9H3N8 390 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ARMC7Q9H6L4 198 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 C12orf10Q9HB07 376 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SEBOXQ9HB31 216 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TMBIM4Q9HC24 238 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 A4GALTQ9NPC4 353 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GIMAP2Q9UG22 337 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MIOXQ9UGB7 285 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TRAV36DV7A0A075B6V5 113 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 GMNCA6NCL1 334 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ZSCAN5BA6NJL1 495 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 CEACAM18A8MTB9 384 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 OGG1O15527 345 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 XPNPEP2O43895 674 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 MITFO75030 526 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 HPRP00739 348 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 HIST1H2ABP04908 130 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ABHD2P08910 425 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 PRG2P13727 222 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 HLA-DOBP13765 273 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 NQO1P15559 274 aaKnown RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 CCNOP22674 350 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 AHCYP23526 432 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 HOXD3P31249 432 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 APLNRP35414 380 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 AMTP48728 403 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TNFAIP6P98066 277 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 BST1Q10588 318 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ZMYND11Q15326 602 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 PNLIPRP3Q17RR3 467 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 KRT71Q3SY84 523 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 LIN52Q52LA3 116 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SPRNQ5BIV9 151 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 XKR7Q5GH72 579 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SLC27A4Q6P1M0 643 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 WDR88Q6ZMY6 472 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF836Q6ZNA1 936 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 HIST3H2AQ7L7L0 130 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SLC16A14Q7RTX9 510 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ZER1Q7Z7L7 766 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ANKRD46Q86W74 232 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 VRK2Q86Y07 508 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 PTOV1Q86YD1 416 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 C10orf107Q8IVU9 208 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 CLIP4Q8N3C7 705 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 OR6S1Q8NH40 331 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 KLF14Q8TD94 323 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 GEMIN6Q8WXD5 167 aaKnown RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM54Q969K7 222 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SLC35B4Q969S0 331 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TUBGCP3Q96CW5 907 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SLC41A3Q96GZ6 507 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 C3orf30Q96M34 536 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 MAGEB18Q96M61 343 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SH3GL3Q99963 347 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 SLC35A5Q9BS91 424 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TEX12Q9BXU0 123 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ROPN1BQ9BZX4 212 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 ROPN1Q9HAT0 212 aaPredicted RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM165Q9HC07 324 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 DCAF16Q9NXF7 216 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 GLTPQ9NZD2 209 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 CALML5Q9NZT1 146 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 MRPL15Q9P015 296 aaKnown RBP4□□□□□ -1.77
ATXN3-228ENST00000554592 RPS6KB2Q9UBS0 482 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 OR14J1Q9UGF5 321 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 TBK1Q9UHD2 729 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 IFT52Q9Y366 437 aa4□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF816-ZNF321PA0A0X1KG74 233 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 LOC100653049A0A140TA62 436 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 A0A1W2PPM1 405 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 FAM90A10PA6NDY2 464 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 H0YL77 283 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 H3BSA7 217 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 P2RY10O00398 339 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 PLPP3O14495 311 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 SURF4O15260 269 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 RIPK2O43353 540 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 KRT34O76011 436 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 KRT75O95678 551 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CH25HO95992 272 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 LIPFP07098 398 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CHRNGP07510 517 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CBLP22681 906 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 STOMP27105 288 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 MPV17P39210 176 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 IER3P46695 156 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 GDI2P50395 445 aaKnown RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 GTF2A1P52655 376 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 BIDP55957 195 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 FGF12P61328 243 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 GNB2P62879 340 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 HSF2Q03933 536 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms