RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CMA1P23946 247 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 LOXP28300 417 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 GNRHRP30968 328 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 GPX4P36969 197 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 FABP6P51161 128 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 AP1S2P56377 157 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 SEMG2Q02383 582 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 ACVR1Q04771 509 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 NRF1Q16656 503 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM249Q2WGJ8 235 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 C11orf71Q6IPW1 123 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 CNIH2Q6PI25 160 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 MBOAT2Q6ZWT7 520 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM252Q8N6L7 170 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 C19orf18Q8NEA5 215 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 OR4K2Q8NGD2 314 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 OR5P2Q8WZ92 322 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 FGF14Q92915 247 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF799Q96GE5 643 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 COL21A1Q96P44 957 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 HIST1H4GQ99525 98 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 RNF126Q9BV68 326 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 DSN1Q9H410 356 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 TRIM45Q9H8W5 580 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-211ENST00000554437 REEP1Q9H902 201 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 ACOT13Q9NPJ3 140 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 CALYQ9NYX4 217 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 CES1P1Q9UKY3 287 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 TFR2Q9UP52 801 aa3.37□□□□□ -1.87
SCFD1-211ENST00000554437 A0A0B4J2E0 115 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 A0A0G2JLM5 398 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 A0A1B0GX12 115 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 PINLYPA6NC86 204 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 VGLL3A8MV65 326 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 ANKRD65E5RJM6 399 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 SLC31A1O15431 190 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 SEMA3DO95025 777 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 RAB36O95755 333 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 IFNA5P01569 189 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 RPSAP08865 295 aaKnown RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TCP1P17987 556 aaKnown RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 GABRG2P18507 467 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 USF1P22415 310 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 AK4P27144 223 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 GLP1RP43220 463 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DS4P43632 304 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 KLK7P49862 253 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 NKX2-5P52952 324 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 GLO1Q04760 184 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 GUSBP1Q15486 140 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 POU2AF1Q16633 256 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TTMPQ5BVD1 217 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 FAM27D1Q5T7N8 215 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 NIPAL1Q6NVV3 410 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 IGFL2Q6UWQ7 119 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 DRAM2Q6UX65 266 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 Q6ZT83 130 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM179Q6ZVK1 233 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 ARRDC1Q8N5I2 433 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 C2orf73Q8N5S3 287 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 OR8K1Q8NGG5 319 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 OR5D18Q8NGL1 313 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 OR5AR1Q8NGP9 310 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 OR51E1Q8TCB6 317 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 DYNC2LI1Q8TCX1 351 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TMEM234Q8WY98 164 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 DCUN1D4Q92564 292 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 SDHCQ99643 169 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-211ENST00000554437 OSBPL11Q9BXB4 747 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TOLLIPQ9H0E2 274 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 NANOGQ9H9S0 305 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TAS2R9Q9NYW1 312 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 TREM2Q9NZC2 230 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 KLF12Q9Y4X4 402 aa3.36□□□□□ -1.87
SCFD1-211ENST00000554437 A0A0G2JRQ6 117 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 KIR2DS1A0A191URI9 304 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 A6NIZ1 184 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 NCBP2LA6PVI3 153 aaKnown RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 C9J4A7 227 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 K7N7A8 449 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF593O00488 134 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 CYTH3O43739 400 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 MPZL1O95297 269 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 PTTG1O95997 202 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 HLA-DRAP01903 254 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 APOEP02649 317 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 CD3GP09693 182 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 HSPD1P10809 573 aaKnown RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 NQO1P15559 274 aaKnown RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 GGT1P19440 569 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 AQP1P29972 269 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 SERPINB5P36952 375 aa3.35□□□□□ -1.87
SCFD1-211ENST00000554437 ZNF121P58317 390 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-211ENST00000554437 RAP1BP61224 184 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms