RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 hCG_38984A0A1B0GV85 526 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM269A0A1B0GVZ9 245 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 C5orf63A6NC05 138 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PPIAL4DF5H284 164 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 J3QLI3 93 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PNPP00491 289 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 MRPL3P09001 348 aaKnown RBP12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PPIAL4FP0DN26 164 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 HTR1FP30939 366 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 POLR2IP36954 125 aaKnown RBP12.9□□□□□ -0.34
SHMT2-204ENST00000553324 GNALP38405 381 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 RIDAP52758 137 aaKnown RBP12.9□□□□□ -0.34
SHMT2-204ENST00000553324 EGR3Q06889 387 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 KCNJ8Q15842 424 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 OR8S1Q8NH09 359 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 OR8B4Q96RC9 309 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 C9orf16Q9BUW7 83 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 TMEM165Q9HC07 324 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 S100A14Q9HCY8 104 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 TRIM36Q9NQ86 728 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 CLN6Q9NWW5 311 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 DCAF16Q9NXF7 216 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 KLHDC2Q9Y2U9 406 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
SHMT2-204ENST00000553324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■■■■ 43.7
SHMT2-204ENST00000553324 MALRD1Q5VYJ5 2156 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 A0A0U1RQV5 110 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ATP6V1B1P15313 513 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 GFOD2Q3B7J2 385 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-204ENST00000553324 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
SHMT2-204ENST00000553324 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 HRASLS5Q96KN8 279 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ADGRL4Q9HBW9 690 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 IMPAD1Q9NX62 359 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF319Q9P2F9 582 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 RNF7Q9UBF6 113 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 IKZF2Q9UKS7 526 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
SHMT2-204ENST00000553324 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 KIAA1324LA8MWY0 1029 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-204ENST00000553324 EI24O14681 340 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 ANOS1P23352 680 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 PMELP40967 661 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 CXCR4P61073 352 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 IL5RAQ01344 420 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 OR8B8Q15620 311 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 ESCO2Q56NI9 601 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 SLC25A30Q5SVS4 291 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 CBR4Q8N4T8 237 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 STMN2Q93045 179 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 MICU1Q9BPX6 476 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 UFSP2Q9NUQ7 469 aa12.88□□□□□ -0.35
SHMT2-204ENST00000553324 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-204ENST00000553324 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHMT2-204ENST00000553324 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-204ENST00000553324 CEACAM18A8MTB9 384 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 M0R129 80 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 PSMD9O00233 223 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 NDUFA2O43678 99 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 FAM20BO75063 409 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 MTRF1O75570 445 aaKnown RBP12.87□□□□□ -0.35
SHMT2-204ENST00000553324 CST4P01036 141 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 GRPP07492 148 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 WNT2P09544 360 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 MAP2K3P46734 347 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 LCN2P80188 198 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 MPPED2Q15777 294 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 MEDAGQ5VYS4 303 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 ZBTB49Q6ZSB9 765 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 NLRC3Q7RTR2 1065 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 GALNT4Q8N4A0 578 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 FAM81AQ8TBF8 368 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 PAPOLGQ9BWT3 736 aaKnown RBP12.87□□□□□ -0.35
SHMT2-204ENST00000553324 PBOV1Q9GZY1 135 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 COPS3Q9UNS2 423 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 LRCH1Q9Y2L9 728 aa12.87□□□□□ -0.35
SHMT2-204ENST00000553324 RHBDD3Q9Y3P4 386 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms