RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SGK3Q96BR1 496 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 SEMA6AQ9H2E6 1030 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 MRPL15Q9P015 296 aaKnown RBP13.27□□□□□ -0.29
CDK4-215ENST00000553237 RNF7Q9UBF6 113 aa13.27□□□□□ -0.29
CDK4-215ENST00000553237 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 A6NLC8 198 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 C3orf80F5H4A9 247 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 XRCC2O43543 280 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 SELENOFO60613 162 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 FSTL3O95633 263 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 CPT2P23786 658 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 CRISP1P54107 249 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 ZNF121P58317 390 aaPredicted RBP13.26□□□□□ -0.29
CDK4-215ENST00000553237 FAM3AP98173 230 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 GFOD2Q3B7J2 385 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 KLHL12Q53G59 568 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 BTNL3Q6UXE8 466 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 DCDC5Q6ZRR9 648 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 SLC16A9Q7RTY1 509 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 CPOQ8IVL8 374 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 THEM6Q8WUY1 208 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 RNF133Q8WVZ7 376 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 SPSB4Q96A44 273 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 CENPNQ96H22 339 aaPredicted RBP13.26□□□□□ -0.29
CDK4-215ENST00000553237 REEP6Q96HR9 211 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 TOR3AQ9H497 397 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 MARCH7Q9H992 704 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 C1orf123Q9NWV4 160 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 ZNF319Q9P2F9 582 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 CLN8Q9UBY8 286 aa13.26□□□□□ -0.29
CDK4-215ENST00000553237 ANK2Q01484 3957 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 ANKRD30BLA7E2S9 258 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 MITFO75030 526 aaPredicted RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 PTBP3O95758 552 aaKnown RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 H2BFMP0C1H6 154 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 OPRL1P41146 370 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 OR8B8Q15620 311 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 WDR25Q64LD2 544 aaPredicted RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 LRRN1Q6UXK5 716 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 ZNF841Q6ZN19 808 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 SPERTQ8NA61 448 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 PLPP7Q8NBV4 271 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 PGAM5Q96HS1 289 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 NUDT16L1Q9BRJ7 211 aaKnown RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 TEX12Q9BXU0 123 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 OPA3Q9H6K4 179 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 PPP1R3EQ9H7J1 279 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 SLC25A19Q9HC21 320 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 KRT84Q9NSB2 600 aa13.25□□□□□ -0.29
CDK4-215ENST00000553237 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 SOX21Q9Y651 276 aaPredicted RBP13.25□□□□□ -0.29
CDK4-215ENST00000553237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 KIR2DS1A0A191URI9 304 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 hCG_1807616A0A1W2PRN6 198 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 LGALS8O00214 317 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 APOC1P02654 83 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 DDOSTP39656 456 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 NAA10P41227 235 aaPredicted RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 ESRRGP62508 458 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 UBA52P62987 128 aaKnown RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 POU4F2Q12837 409 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 KDM4DQ6B0I6 523 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 PRSS45Q7RTY3 260 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 OR8S1Q8NH09 359 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 TECTBQ96PL2 329 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 PKP2Q99959 881 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 MS4A7Q9GZW8 240 aaPredicted RBP13.24□□□□□ -0.29
CDK4-215ENST00000553237 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 OR10A2Q9H208 303 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 RASSF4Q9H2L5 321 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 SP140LQ9H930 580 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 TVP23BQ9NYZ1 205 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 CTSZQ9UBR2 303 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 OAZ3Q9UMX2 235 aa13.24□□□□□ -0.29
CDK4-215ENST00000553237 IGHV3OR15-7A0A075B7D8 119 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 hCG_38984A0A1B0GV85 526 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 TMEM89A2RUT3 159 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 SAC3D1A6NKF1 404 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 H3BNX3 289 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 ADAM20O43506 726 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 GYPAP02724 150 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 LYNP07948 512 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 CFPP27918 469 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 PSMB10P40306 273 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 GSK3AP49840 483 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 HCCSP53701 268 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 RPS7P62081 194 aaKnown RBP13.23□□□□□ -0.29
CDK4-215ENST00000553237 MZT1Q08AG7 82 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 SNAPC1Q16533 368 aa13.23□□□□□ -0.29
CDK4-215ENST00000553237 DOK3Q7L591 496 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms