RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 TIMP3P35625 211 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 EFNB2P52799 333 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 ZNF92Q03936 586 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 PLP2Q04941 152 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 SCN1BQ07699 218 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 PP6455Q8WZ26 134 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 MS4A3Q96HJ5 214 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 CHST5Q9GZS9 411 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 TMEM272A0A1B0GTI8 110 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 LDLRAD4O15165 306 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 MAGEB3O15480 346 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 TMIGD3P0DMS9 266 aaPredicted RBP16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 ARSBP15848 533 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 CCNOP22674 350 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 DEFA1P59665 94 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 DEFA3P59666 94 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 UBE2V2Q15819 145 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 UTS2BQ765I0 119 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 BIVMQ86UB2 503 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 IZUMO1Q8IYV9 350 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 MINDY2Q8NBR6 621 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 SEMA6DQ8NFY4 1073 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 SETD6Q8TBK2 473 aa16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 S100A16Q96FQ6 103 aaKnown RBP16.96■□□□□ 0.31
RBFOX1-215ENST00000553186 hCG_38984A0A1B0GV85 526 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 ALX3O95076 343 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 ALDOBP05062 364 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 FAM3AP98173 230 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 TAB1Q15750 504 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 BAIAP2L2Q6UXY1 529 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 C3P1Q6ZMU1 363 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 CCDC36Q8IYA8 594 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 ZNF610Q8N9Z0 462 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 SPACA5Q96QH8 159 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 PROCRQ9UNN8 238 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 MRPS7Q9Y2R9 242 aaKnown RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 DSPP15924 2871 aaKnown RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 CIB4A0PJX0 185 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 XRCC2O43543 280 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 PTTG1O95997 202 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 SERPINA5P05154 406 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 HOXD4P09016 255 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 OCMP0CE72 109 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 CDK2P24941 298 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 ZNF93P35789 620 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 PRSS12P56730 875 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 TSC22D1Q15714 1073 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 PRR30Q53SZ7 412 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 DMRTC1Q5HYR2 192 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 CDH26Q8IXH8 852 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 TRIM63Q969Q1 353 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 COX4I2Q96KJ9 171 aa16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 OPN3Q9H1Y3 402 aaPredicted RBP16.95■□□□□ 0.3
RBFOX1-215ENST00000553186 IL2RAP01589 272 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 PTH2RP49190 550 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 GSK3AP49840 483 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 OR8B8Q15620 311 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 EIF2S3LQ2VIR3 472 aaKnown RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 CRIP3Q6Q6R5 217 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 UNQ6494/PRO21346Q6UXR6 183 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 GDPD3Q7L5L3 318 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 C1orf162Q8NEQ5 155 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 ZFP3Q96NJ6 502 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 ASF1BQ9NVP2 202 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 PLA2G10O15496 165 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 LANCL1O43813 399 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 CTAG2O75638 210 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 PRF1P14222 555 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 CEACAM8P31997 349 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 MAP2K3P46734 347 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 MMP15P51511 669 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 PITPNAQ00169 270 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 RIPPLY1Q0D2K3 151 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 ASAH1Q13510 395 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 TRIQKQ629K1 86 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 PAQR4Q8N4S7 273 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 AKAP1Q92667 903 aaKnown RBP eCLIP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 THAP7Q9BT49 309 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 RABL2AQ9UBK7 228 aaPredicted RBP16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 RABL2BQ9UNT1 228 aa16.94■□□□□ 0.3
RBFOX1-215ENST00000553186 A0A1W2PR80 420 aa16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 CTDSPLO15194 276 aa16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 HOXB1P14653 301 aaPredicted RBP16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 ZNF14P17017 642 aaPredicted RBP16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 UBE2NP61088 152 aaKnown RBP16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 DOLPP1Q86YN1 238 aa16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 APOBEC3DQ96AK3 386 aaPredicted RBP16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 INTS1Q8N201 2190 aaKnown RBP16.93■□□□□ 0.3
RBFOX1-215ENST00000553186 LINC00854A0A1B0GVQ3 168 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 SSX4O60224 188 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 NGFP01138 241 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 APLNRP35414 380 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 MNDAP41218 407 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 QRFPP83859 136 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 TMEM69Q5SWH9 247 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 TMEM42Q69YG0 159 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 MYPOPQ86VE0 399 aaPredicted RBP16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 SLC30A7Q8NEW0 376 aa16.92■□□□□ 0.3
RBFOX1-215ENST00000553186 REPIN1Q9BWE0 567 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms