RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 Q6ZR03 302 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 COLCA1Q6ZS62 124 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ZCCHC23Q6ZST2 131 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OLIG3Q7RTU3 272 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LRRC34Q8IZ02 419 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 C10orf53Q8N6V4 93 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LY6G5BQ8NDX9 201 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR8G5Q8NG78 346 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR7A2PQ8NGA2 310 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR52H1Q8NGJ2 320 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 OR5AK3PQ8NH89 298 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ADAMTS16Q8TE57 1224 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MYDGFQ969H8 173 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SLC41A3Q96GZ6 507 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SLC25A44Q96H78 314 aaPredicted RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 KCNA7Q96RP8 456 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 DUSP26Q9BV47 211 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 METTL8Q9H825 291 aaKnown RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 EDA2RQ9HAV5 297 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 SIRT7Q9NRC8 400 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ABCB10Q9NRK6 738 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM100Q9NV29 134 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 FGFR1OP2Q9NVK5 253 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 MRPL39Q9NYK5 338 aaKnown RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM216Q9P0N5 145 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 RNF7Q9UBF6 113 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 KCNG2Q9UJ96 466 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 TMCC3Q9ULS5 477 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF256Q9Y2P7 627 aaPredicted RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 CHST2Q9Y4C5 530 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 CAPN7Q9Y6W3 813 aa4.15□□□□□ -1.75
CKAP4-203ENST00000553039 NUP214P35658 2090 aaPredicted RBP4.15□□□□□ -1.75
CKAP4-203ENST00000553039 LOC100509620A0A075B734 347 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 hCG_1809904A0A1W2PP81 198 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1W2PPE2 198 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1W2PR64 198 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 PSMD9O00233 223 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 PLPP3O14495 311 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CTDSP2O14595 271 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SPRY2O43597 315 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 EDF1O60869 148 aaKnown RBP4.14□□□□□ -1.75
CKAP4-203ENST00000553039 HPRP00739 348 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SERPINE1P05121 402 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 BPGMP07738 259 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CPA3P15088 417 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF32P17041 273 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 BGNP21810 368 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CBLP22681 906 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ATP6V1E1P36543 226 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 RPS19P39019 145 aaKnown RBP4.14□□□□□ -1.75
CKAP4-203ENST00000553039 PMELP40967 661 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 FOXA1P55317 472 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 HBA1P69905 142 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 PSG4Q00888 419 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 NHLH2Q02577 135 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 EGR4Q05215 589 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 HNRNPA0Q13151 305 aaKnown RBP4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SGCAQ16586 387 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CFAP157Q5JU67 520 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 FAM201AQ5SY85 155 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 FAM27BQ5VT28 67 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ZYG11AQ6WRX3 759 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 WDR88Q6ZMY6 472 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF836Q6ZNA1 936 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SLC35D2Q76EJ3 337 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SLC36A1Q7Z2H8 476 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 HMGN2P46Q86SG4 172 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 NUDCD3Q8IVD9 361 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM151AQ8N4L1 468 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CCNYL1Q8N7R7 359 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CCDC197Q8NCU1 140 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SLC26A10Q8NG04 563 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 OR5D13Q8NGL4 314 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 OR52P1PQ8NH57 321 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CLHC1Q8NHS4 586 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 Q8TCH9 128 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 DNAJA4Q8WW22 397 aaPredicted RBP4.14□□□□□ -1.75
CKAP4-203ENST00000553039 RORBQ92753 470 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 L3HYPDHQ96EM0 354 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 FCRL1Q96LA6 429 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 SIKE1Q9BRV8 207 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF649Q9BS31 505 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 WACQ9BTA9 647 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 OPA3Q9H6K4 179 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 HEXA-AS1Q9H8Q6 139 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ZFP57Q9NU63 452 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 C20orf141Q9NUB4 165 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 CALML5Q9NZT1 146 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 PEMTQ9UBM1 199 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 KAAG1Q9UBP8 84 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 FBXL17Q9UF56 701 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 EMCNQ9ULC0 261 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 ARL2BPQ9Y2Y0 163 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 NOP16Q9Y3C1 178 aaKnown RBP4.14□□□□□ -1.75
CKAP4-203ENST00000553039 RYR2Q92736 4967 aa4.14□□□□□ -1.75
CKAP4-203ENST00000553039 RNF103-CHMP3A0A140T963 221 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 OOEPA6NGQ2 149 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 VGLL3A8MV65 326 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 CENPBD1B2RD01 187 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 G3V2L1 256 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms