RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 UNC119Q13432 240 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 TSC22D1Q15714 1073 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 TBR1Q16650 682 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 SEM1Q6ZVN7 128 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 ANGPTL5Q86XS5 388 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 BCL2L2Q92843 193 aaPredicted RBP17.11■□□□□ 0.33
SSH1-209ENST00000551165 ITFG2Q969R8 447 aa17.11■□□□□ 0.33
SSH1-209ENST00000551165 ZNF71Q9NQZ8 489 aaPredicted RBP17.11■□□□□ 0.33
SSH1-209ENST00000551165 RBFOX1Q9NWB1 397 aaKnown RBP17.11■□□□□ 0.33
SSH1-209ENST00000551165 A0A1W2PR80 420 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 C5orf49A4QMS7 147 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 GGT3PA6NGU5 568 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 K7ENP7 123 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 GSTZ1O43708 216 aaPredicted RBP17.1■□□□□ 0.33
SSH1-209ENST00000551165 IGHV1-2P23083 117 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 BTCP35070 178 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 QRFPP83859 136 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 INO80CQ6PI98 192 aaPredicted RBP17.1■□□□□ 0.33
SSH1-209ENST00000551165 OR5D18Q8NGL1 313 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 SSC4DQ8WTU2 575 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 FOXRED1Q96CU9 486 aaPredicted RBP17.1■□□□□ 0.33
SSH1-209ENST00000551165 ELF5Q9UKW6 265 aaPredicted RBP17.1■□□□□ 0.33
SSH1-209ENST00000551165 PTPRQQ9UMZ3 2332 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 TRAV18A0A075B6X5 111 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 GDNFP39905 211 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 GUCA2AQ02747 115 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 RPRMLQ8N4K4 120 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 ENKURQ8TC29 256 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 CYYR1Q96J86 154 aa17.1■□□□□ 0.33
SSH1-209ENST00000551165 LYZL6O75951 148 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 VSIG8P0DPA2 414 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 STOMP27105 288 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 RTN4RL2Q86UN3 420 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 TOMM5Q8N4H5 51 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 PIGTQ969N2 578 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 ZMAT3Q9HA38 289 aaKnown RBP17.09■□□□□ 0.33
SSH1-209ENST00000551165 GPR173Q9NS66 373 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 A0A1W2PP11 408 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 WIPF3A6NGB9 483 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 ZZEF1O43149 2961 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 THBS4P35443 961 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 PMPCAQ10713 525 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 AWAT2Q6E213 333 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 C3P1Q6ZMU1 363 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 C1QL2Q7Z5L3 287 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 SEMA6DQ8NFY4 1073 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 WNT2BQ93097 391 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 RNF170Q96K19 258 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 C1orf147Q96MC9 270 aaPredicted RBP17.09■□□□□ 0.33
SSH1-209ENST00000551165 UQCC2Q9BRT2 126 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 C1QTNF5Q9BXJ0 243 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 CHST5Q9GZS9 411 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 GLRX2Q9NS18 164 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 CACNG2Q9Y698 323 aa17.09■□□□□ 0.33
SSH1-209ENST00000551165 GABARAPH6UMI1 98 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 RAD51DO75771 328 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 FCER2P06734 321 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 GABRA1P14867 456 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 FAM3AP98173 230 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 KLF9Q13886 244 aaPredicted RBP17.08■□□□□ 0.33
SSH1-209ENST00000551165 TBRG1Q3YBR2 411 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 COLCA1Q6ZS62 124 aa17.08■□□□□ 0.33
SSH1-209ENST00000551165 A0A0B4J293 547 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 MEIS3P1A6NDR6 274 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 BOLA2-SMG1P6H3BVE0 249 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 MTRF1O75570 445 aaKnown RBP17.08■□□□□ 0.32
SSH1-209ENST00000551165 NGFP01138 241 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 ERCC1P07992 297 aaPredicted RBP17.08■□□□□ 0.32
SSH1-209ENST00000551165 GSK3AP49840 483 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 GLIPR1L1Q6UWM5 242 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 MYPOPQ86VE0 399 aaPredicted RBP17.08■□□□□ 0.32
SSH1-209ENST00000551165 ACBD4Q8NC06 268 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 TMEM104Q8NE00 496 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 UPRTQ96BW1 309 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 CMBLQ96DG6 245 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 POM121L2Q96KW2 1035 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 GPR137Q96N19 417 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 DIABLOQ9NR28 239 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 RAXQ9Y2V3 346 aa17.08■□□□□ 0.32
SSH1-209ENST00000551165 hCG_38984A0A1B0GV85 526 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 AHRRA9YTQ3 701 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 TOXO94900 526 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 MT-ND4P03905 459 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 MNDAP41218 407 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 KISS1Q15726 138 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 MZT2BQ6NZ67 158 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 MDP1Q86V88 176 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 FCAMRQ8WWV6 532 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 MRPS28Q9Y2Q9 187 aaKnown RBP17.07■□□□□ 0.32
SSH1-209ENST00000551165 OR14I1A6ND48 311 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 RPUSD3Q6P087 351 aaKnown RBP17.07■□□□□ 0.32
SSH1-209ENST00000551165 PP6455Q8WZ26 134 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 ZC3HAV1LQ96H79 300 aaKnown RBP17.07■□□□□ 0.32
SSH1-209ENST00000551165 ZNF75AQ96N20 296 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 GPER1Q99527 375 aa17.07■□□□□ 0.32
SSH1-209ENST00000551165 INTS1Q8N201 2190 aaKnown RBP17.06■□□□□ 0.32
SSH1-209ENST00000551165 CELA3BP08861 270 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms