RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KIR2DS1A0A191URI9 304 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 C22orf46C9J442 243 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 PRR23D1E9PI22 279 aaPredicted RBP13.6□□□□□ -0.23
VPS29-207ENST00000549970 DYNC1I1O14576 645 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 GYG2O15488 501 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 SELENOFO60613 162 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 PRR23D2P0DMB1 279 aaPredicted RBP13.6□□□□□ -0.23
VPS29-207ENST00000549970 PPIAL4GP0DN37 164 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 DDOSTP39656 456 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 FAM3AP98173 230 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 MZT1Q08AG7 82 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 BAMBIQ13145 260 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 FLOT2Q14254 428 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 KCNJ8Q15842 424 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 TUSC1Q2TAM9 212 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 DNAL1Q4LDG9 190 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 KLHL12Q53G59 568 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 OR8S1Q8NH09 359 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 SGK3Q96BR1 496 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 UPRTQ96BW1 309 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 SP140LQ9H930 580 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 MARCH7Q9H992 704 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 C14orf119Q9NWQ9 140 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 CTSZQ9UBR2 303 aa13.6□□□□□ -0.23
VPS29-207ENST00000549970 SOX21Q9Y651 276 aaPredicted RBP13.6□□□□□ -0.23
VPS29-207ENST00000549970 OOEPA6NGQ2 149 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 ADAM20O43506 726 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 APOC1P02654 83 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 H2BFMP0C1H6 154 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 OSMP13725 252 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 PRKACGP22612 351 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 PRTN3P24158 256 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 OPRL1P41146 370 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 CBX1P83916 185 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 AWAT1Q58HT5 328 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 PRSS45Q7RTY3 260 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 GCSAMQ8N6F7 178 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 OR52H1Q8NGJ2 320 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 BCAS4Q8TDM0 211 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 PGAM5Q96HS1 289 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 C1orf147Q96MC9 270 aaPredicted RBP13.59□□□□□ -0.23
VPS29-207ENST00000549970 OR10A2Q9H208 303 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 ZNF319Q9P2F9 582 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 ERVK-18Q9QC07 812 aa13.59□□□□□ -0.23
VPS29-207ENST00000549970 TRAV38-1A0A0B4J264 116 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 hCG_38984A0A1B0GV85 526 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 ENSAO43768 121 aaKnown RBP13.58□□□□□ -0.24
VPS29-207ENST00000549970 FKBP6O75344 327 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 GYPAP02724 150 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 HMGN1P05114 100 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 LYNP07948 512 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 HOXB6P17509 224 aaKnown RBP13.58□□□□□ -0.24
VPS29-207ENST00000549970 EGR1P18146 543 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 NAA10P41227 235 aaPredicted RBP13.58□□□□□ -0.24
VPS29-207ENST00000549970 NPY4RP50391 375 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 FGF12P61328 243 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
VPS29-207ENST00000549970 POU4F2Q12837 409 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 WDR86Q86TI4 376 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.58□□□□□ -0.24
VPS29-207ENST00000549970 CPOQ8IVL8 374 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 OTOSQ8NHW6 89 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 PPP1R3EQ9H7J1 279 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 YY1AP1Q9H869 796 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 TRIM36Q9NQ86 728 aa13.58□□□□□ -0.24
VPS29-207ENST00000549970 IGHV3OR15-7A0A075B7D8 119 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 MDFIC2A0A1B0GVS7 189 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 PRODHO43272 600 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 PLATP00750 562 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 ANXA8P13928 327 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 CFL1P23528 166 aaKnown RBP13.57□□□□□ -0.24
VPS29-207ENST00000549970 MTNR1AP48039 350 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 GSK3AP49840 483 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 CSNK2BP67870 215 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 CDK5Q00535 292 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 TMEM236Q5W0B7 351 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 C9orf139Q6ZV77 190 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 RHOUQ7L0Q8 258 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 FAM90A1Q86YD7 464 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 LRRC29Q8WV35 223 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
VPS29-207ENST00000549970 PCGF1Q9BSM1 259 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 PAPOLGQ9BWT3 736 aaKnown RBP13.57□□□□□ -0.24
VPS29-207ENST00000549970 RASSF4Q9H2L5 321 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 ZMAT3Q9HA38 289 aaKnown RBP13.57□□□□□ -0.24
VPS29-207ENST00000549970 SMURF1Q9HCE7 757 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 DNAJB9Q9UBS3 223 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 POMPQ9Y244 141 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 KLHDC2Q9Y2U9 406 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 RHBDD3Q9Y3P4 386 aa13.57□□□□□ -0.24
VPS29-207ENST00000549970 TCRBV3S1A0A5B6 114 aa13.56□□□□□ -0.24
VPS29-207ENST00000549970 TNFRSF13BO14836 293 aaPredicted RBP13.56□□□□□ -0.24
VPS29-207ENST00000549970 NDUFA2O43678 99 aa13.56□□□□□ -0.24
VPS29-207ENST00000549970 LHBP01229 141 aa13.56□□□□□ -0.24
VPS29-207ENST00000549970 HKR1P10072 659 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms