RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ADAM20O43506 726 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 XRCC2O43543 280 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ENSAO43768 121 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ANXA2P07355 339 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 RAP2AP10114 183 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 MMP9P14780 707 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 CALB2P22676 271 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 GRK5P34947 590 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 CFHR2P36980 270 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 DDOSTP39656 456 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 SLC15A1P46059 708 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 NPY4RP50391 375 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 BLVRAP53004 296 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 GRB2P62993 217 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 FAM57BQ71RH2 274 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ERI1Q8IV48 349 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 TIGD4Q8IY51 512 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ADGRG5Q8IZF4 528 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 FGFRL1Q8N441 504 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 OR6N2Q8NGY6 317 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 GIPC3Q8TF64 312 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 CCDC124Q96CT7 223 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 ASB9Q96DX5 294 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 REEP6Q96HR9 211 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 INTS14Q96SY0 518 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 PCGF1Q9BSM1 259 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 OPA3Q9H6K4 179 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 DNAJC27Q9NZQ0 273 aa11.06□□□□□ -0.64
CPSF6-204ENST00000547486 PRPF19Q9UMS4 504 aaKnown RBP11.06□□□□□ -0.64
CPSF6-204ENST00000547486 CENPVL3A0A0U1RRI6 287 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 hCG_38984A0A1B0GV85 526 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 A0A1B0GW55 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 ANKRD30BLA7E2S9 258 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 ZNF879B4DU55 563 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 H3BN98 237 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 GLCEO94923 617 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 FAM107AO95990 144 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 CST1P01037 141 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L2P0CJ85 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L3P0CJ86 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L4P0CJ87 422 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L5P0CJ88 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L6P0CJ89 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L7P0CJ90 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 ZNF3P17036 446 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 OMGP23515 440 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 POU1F1P28069 291 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 HSD11B1P28845 292 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 OPRL1P41146 370 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 CSNK2BP67870 215 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 KCNJ8Q15842 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 CD276Q5ZPR3 534 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
CPSF6-204ENST00000547486 SHISA2Q6UWI4 295 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 HS3ST5Q8IZT8 346 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 OR1M1Q8NGA1 313 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 TEX47Q8TBZ9 253 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 CANT1Q8WVQ1 401 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 SEH1LQ96EE3 360 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 OR51V1Q9H2C8 321 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 TOR3AQ9H497 397 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 UNKLQ9H9P5 680 aaKnown RBP11.05□□□□□ -0.64
CPSF6-204ENST00000547486 BRD7Q9NPI1 651 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 C14orf119Q9NWQ9 140 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 DUX4Q9UBX2 424 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 RHBDD3Q9Y3P4 386 aa11.05□□□□□ -0.64
CPSF6-204ENST00000547486 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.04□□□□□ -0.64
CPSF6-204ENST00000547486 hCG_1807616A0A1W2PRN6 198 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.04□□□□□ -0.64
CPSF6-204ENST00000547486 DVL1O14640 695 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 NDUFA2O43678 99 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 TOX4O94842 621 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 LIPFP07098 398 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
CPSF6-204ENST00000547486 PRKACGP22612 351 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 GSK3AP49840 483 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 GINS1Q14691 196 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 TIGD6Q17RP2 521 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 PRR31Q5SQ13 230 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 GPR157Q5UAW9 335 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 PLBD1Q6P4A8 553 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 Q6YL49 198 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 BTN2A1Q7KYR7 527 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 RHOUQ7L0Q8 258 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 OR8S1Q8NH09 359 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 LRRC29Q8WV35 223 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 TMIGD2Q96BF3 282 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 LRGUKQ96M69 825 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 WDFY2Q96P53 400 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 CCL13Q99616 98 aa11.04□□□□□ -0.64
CPSF6-204ENST00000547486 THTPAQ9BU02 230 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms