RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SULT1B1O43704 296 aa26.31■■□□□ 1.8
CCM2-219ENST00000544363 IGLV1-44P01699 117 aa26.31■■□□□ 1.8
CCM2-219ENST00000544363 SNRPBP14678 240 aaKnown RBP26.31■■□□□ 1.8
CCM2-219ENST00000544363 TNK1Q13470 666 aa26.31■■□□□ 1.8
CCM2-219ENST00000544363 OR8B8Q15620 311 aa26.31■■□□□ 1.8
CCM2-219ENST00000544363 ZNF671Q8TAW3 534 aa26.31■■□□□ 1.8
CCM2-219ENST00000544363 MOV10Q9HCE1 1003 aaKnown RBP26.31■■□□□ 1.8
CCM2-219ENST00000544363 J3QW42 95 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 ICMTO60725 284 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 SPANXN2Q5MJ10 180 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 C1QTNF12Q5T7M4 302 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 UTS2BQ765I0 119 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 MRI1Q9BV20 369 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 REPIN1Q9BWE0 567 aaKnown RBP26.3■■□□□ 1.8
CCM2-219ENST00000544363 ACTR6Q9GZN1 396 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 CHST5Q9GZS9 411 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 EIF3KQ9UBQ5 218 aaKnown RBP26.3■■□□□ 1.8
CCM2-219ENST00000544363 STEAP1Q9UHE8 339 aa26.3■■□□□ 1.8
CCM2-219ENST00000544363 ERCC1P07992 297 aaPredicted RBP26.29■■□□□ 1.8
CCM2-219ENST00000544363 ZNF45Q02386 682 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 GK2Q14410 553 aaPredicted RBP26.29■■□□□ 1.8
CCM2-219ENST00000544363 OR5AS1Q8N127 324 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 OR5L1Q8NGL2 311 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 FOXRED1Q96CU9 486 aaPredicted RBP26.29■■□□□ 1.8
CCM2-219ENST00000544363 LIN7BQ9HAP6 207 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 ADAM30Q9UKF2 790 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 SPATA2Q9UM82 520 aa26.29■■□□□ 1.8
CCM2-219ENST00000544363 SLC17A2O00624 439 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 PRSS12P56730 875 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 ST3GAL2Q16842 350 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 RFPL4BQ6ZWI9 263 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 LYPD6Q86Y78 171 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 SAMD12Q8N8I0 201 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 OR5H6Q8NGV6 325 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 MUCL1Q96DR8 90 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 OPA3Q9H6K4 179 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 PTTG3PQ9NZH4 202 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 ALX3O95076 343 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 CECR9P0C854 216 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 CALCBP10092 127 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 CLDN12P56749 244 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 FAM166AQ6J272 317 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 OR52N4Q8NGI2 321 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 DIRAS2Q96HU8 199 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 USB1Q9BQ65 265 aaKnown RBP26.28■■□□□ 1.8
CCM2-219ENST00000544363 POFUT1Q9H488 388 aa26.28■■□□□ 1.8
CCM2-219ENST00000544363 CGGBP1Q9UFW8 167 aaPredicted RBP26.28■■□□□ 1.8
CCM2-219ENST00000544363 NBEAQ8NFP9 2946 aa26.27■■□□□ 1.8
CCM2-219ENST00000544363 PPA1Q15181 289 aa26.27■■□□□ 1.8
CCM2-219ENST00000544363 MRPL21Q7Z2W9 205 aaKnown RBP26.27■■□□□ 1.8
CCM2-219ENST00000544363 JAGN1Q8N5M9 183 aa26.27■■□□□ 1.8
CCM2-219ENST00000544363 LGALS14Q8TCE9 139 aa26.27■■□□□ 1.8
CCM2-219ENST00000544363 ITFG2Q969R8 447 aa26.27■■□□□ 1.8
CCM2-219ENST00000544363 IGHV1-18A0A0C4DH31 117 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 IGKV1-9A0A0C4DH69 117 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 C16orf97H3BN30 126 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 J3QRK9 145 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 SMPD2O60906 423 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 TAB1Q15750 504 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 RAB11BQ15907 218 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 C1orf100Q5SVJ3 147 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 BORCS5Q969J3 196 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 OR51B6Q9H340 312 aa26.26■■□□□ 1.79
CCM2-219ENST00000544363 ALDOBP05062 364 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 ZNF35P13682 527 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 ELK1P19419 428 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 CCKARP32238 428 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 EVX1P49640 407 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 HLXQ14774 488 aaPredicted RBP26.25■■□□□ 1.79
CCM2-219ENST00000544363 UBE2V2Q15819 145 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 C3orf36Q3SXR2 165 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 ZBTB37Q5TC79 503 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 LRRC28Q86X40 367 aaPredicted RBP26.25■■□□□ 1.79
CCM2-219ENST00000544363 CDH26Q8IXH8 852 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 OR6M1Q8NGM8 313 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 METTL17Q9H7H0 456 aaPredicted RBP26.25■■□□□ 1.79
CCM2-219ENST00000544363 OR5V1Q9UGF6 321 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 HTR2CP28335 458 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 SCAND1P57086 179 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 DCTN2Q13561 401 aaKnown RBP26.25■■□□□ 1.79
CCM2-219ENST00000544363 TMEM42Q69YG0 159 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 CNIH2Q6PI25 160 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 CMTM3Q96MX0 182 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 SORCS2Q96PQ0 1159 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 NKX3-1Q99801 234 aaPredicted RBP26.25■■□□□ 1.79
CCM2-219ENST00000544363 V9GYH0 126 aa26.25■■□□□ 1.79
CCM2-219ENST00000544363 MYO7BQ6PIF6 2116 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 FAM25AB3EWG3 89 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 FAM25CB3EWG5 89 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 FAM25GB3EWG6 89 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 MAGEB3O15480 346 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 EIF4EP06730 217 aaKnown RBP26.24■■□□□ 1.79
CCM2-219ENST00000544363 PPP5CP53041 499 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 UCP2P55851 309 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 P2RY14Q15391 338 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 CLVS2Q5SYC1 327 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 SLC25A28Q96A46 364 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 UQCC2Q9BRT2 126 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 OR10A4Q9H209 315 aa26.24■■□□□ 1.79
CCM2-219ENST00000544363 ETV7Q9Y603 341 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms