RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 EDN3P14138 238 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 PMPCAQ10713 525 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 SLC22A6Q4U2R8 563 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 OLFML2AQ68BL7 652 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 AWAT2Q6E213 333 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 VWA1Q6PCB0 445 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 CRIP3Q6Q6R5 217 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 SMIM4Q8WVI0 70 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 GPER1Q99527 375 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 NUDT15Q9NV35 164 aa11.91□□□□□ -0.5
HCFC2-202ENST00000544223 VSIG8P0DPA2 414 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 CPN1P15169 458 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ANKRD16Q6P6B7 361 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 DOK3Q7L591 496 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF101Q8IZC7 436 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZADH2Q8N4Q0 377 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 C9orf106Q8NAJ2 232 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 MCUBQ9NWR8 336 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF629Q9UEG4 869 aaPredicted RBP11.9□□□□□ -0.5
HCFC2-202ENST00000544223 CADP27708 2225 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 TMEM235A6NFC5 223 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 RAD51DO75771 328 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 CEACAM4O75871 244 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 CELA3BP08861 270 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 RAB1AP62820 205 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF169Q14929 603 aaPredicted RBP11.9□□□□□ -0.5
HCFC2-202ENST00000544223 BCL2A1Q16548 175 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 GLIPR1L1Q6UWM5 242 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 BHLHE23Q8NDY6 225 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 OR6M1Q8NGM8 313 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 IRF2BPLQ9H1B7 796 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 MOB1AQ9H8S9 216 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ZNF581Q9P0T4 197 aa11.9□□□□□ -0.5
HCFC2-202ENST00000544223 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 CTSSP25774 331 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 PTBP1P26599 531 aaKnown RBP eCLIP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 SCRN3Q0VDG4 424 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 KLF9Q13886 244 aaPredicted RBP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 RBMXL3Q8N7X1 1067 aaKnown RBP11.89□□□□□ -0.51
HCFC2-202ENST00000544223 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 DMRTB1Q96MA1 342 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 POFUT1Q9H488 388 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 FAM230AA0A1W2PPH8 454 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 XRCC3O43542 346 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 DHRS3O75911 302 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 ALDOBP05062 364 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 FCGR2AP12318 317 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 SLC6A1P30531 599 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 VEGFCP49767 419 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 PITPNAQ00169 270 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 SPATA46Q5T0L3 261 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 SPACA3Q8IXA5 215 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 CHAC2Q8WUX2 184 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
HCFC2-202ENST00000544223 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 SPRY1O43609 319 aaPredicted RBP11.88□□□□□ -0.51
HCFC2-202ENST00000544223 IGLV3-1P01715 115 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 IGHG3P01860 377 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 GNB3P16520 340 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 CCL1P22362 96 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 SNTB2Q13425 540 aaKnown RBP11.88□□□□□ -0.51
HCFC2-202ENST00000544223 MZT2BQ6NZ67 158 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 ADGRE4PQ86SQ3 457 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 RAB40AQ8WXH6 277 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 PHF21AQ96BD5 680 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 ELL3Q9HB65 397 aaPredicted RBP11.88□□□□□ -0.51
HCFC2-202ENST00000544223 MRPS28Q9Y2Q9 187 aaKnown RBP11.88□□□□□ -0.51
HCFC2-202ENST00000544223 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 LOC390937A0A1W2PQ73 354 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 NR4A2P43354 598 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 ESPL1Q14674 2120 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 KISS1Q15726 138 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 PLA1AQ53H76 456 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 AGAP6Q5VW22 663 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 OR10A2Q9H208 303 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 METTL17Q9H7H0 456 aaPredicted RBP11.88□□□□□ -0.51
HCFC2-202ENST00000544223 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
HCFC2-202ENST00000544223 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
HCFC2-202ENST00000544223 IGHV3-64DA0A0J9YX35 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms