RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FAM71F1Q96KD3 344 aaPredicted RBP11.61□□□□□ -0.55
SP140-213ENST00000543928 FRRS1LQ9P0K9 344 aa11.61□□□□□ -0.55
SP140-213ENST00000543928 A0A1B0GTI1 187 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 MT-ND2P03891 347 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 EEF1B2P24534 225 aaKnown RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 DDOSTP39656 456 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 MAGEB1P43366 347 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 CCR9P51686 369 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 GTF2A1P52655 376 aaPredicted RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 EFNA4P52798 201 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 TNK1Q13470 666 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 ALKBH1Q13686 389 aaKnown RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 TSTQ16762 297 aaKnown RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 RNLSQ5VYX0 342 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 NANOGP1Q8N7R0 232 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 ZNF485Q8NCK3 441 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 OR13G1Q8NGZ3 307 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 HAVCR2Q8TDQ0 301 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 NEU4Q8WWR8 484 aaPredicted RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 SLC30A2Q9BRI3 323 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 CDCA4Q9BXL8 241 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 CCDC90BQ9GZT6 254 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 TMEM100Q9NV29 134 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 BABAM2Q9NXR7 383 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 MRPL15Q9P015 296 aaKnown RBP11.6□□□□□ -0.55
SP140-213ENST00000543928 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 ZDHHC8Q9ULC8 765 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 ERGIC3Q9Y282 383 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 LRRC42Q9Y546 428 aa11.6□□□□□ -0.55
SP140-213ENST00000543928 A0A1B0GVI7 797 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 LOC107986453A0A1B0GWG9 222 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 OR4C45A6NMZ5 311 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 ANKRD30BLA7E2S9 258 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 H3BSH0 61 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 SYT7O43581 403 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 MTRF1O75570 445 aaKnown RBP11.59□□□□□ -0.55
SP140-213ENST00000543928 DHRS3O75911 302 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 LY6HO94772 140 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 LALBAP00709 142 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
SP140-213ENST00000543928 HLA-DPB1P04440 258 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 ADH4P08319 380 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 UBCP0CG48 685 aaKnown RBP11.59□□□□□ -0.55
SP140-213ENST00000543928 CCL1P22362 96 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 CA6P23280 308 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 ACKR3P25106 362 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 MAP2K3P46734 347 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 TGM4P49221 684 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 ART1P52961 327 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 WNT4P56705 351 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 CCL8P80075 99 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 IRF3Q14653 427 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 XAF1Q6GPH4 301 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 DOK3Q7L591 496 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 PRSS48Q7RTY5 328 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 RDH10Q8IZV5 341 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 PLPP7Q8NBV4 271 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 CSNK2A3Q8NEV1 391 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 OR10AD1Q8NGE0 317 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 ELMOD3Q96FG2 381 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 DIRC2Q96SL1 478 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 FOXC2Q99958 501 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 BARX1Q9HBU1 254 aaPredicted RBP11.59□□□□□ -0.55
SP140-213ENST00000543928 TRIM36Q9NQ86 728 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 NKIRAS2Q9NYR9 191 aa11.59□□□□□ -0.55
SP140-213ENST00000543928 MYO9AB2RTY4 2548 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 TRBV2A0A0J9YWF9 115 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 A0A1B0GWJ7 208 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 H0YL77 283 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 MLNRO43193 412 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 SSX4O60224 188 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 NCR1O76036 304 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 HPXP02790 462 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 ATP6V1B1P15313 513 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 GABARAPL2P60520 117 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 TNFAIP6P98066 277 aaPredicted RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 CDK5R1Q15078 307 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 FAM209AQ5JX71 171 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 RPL22L1Q6P5R6 122 aaKnown RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 FTMTQ8N4E7 242 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 ZNF676Q8N7Q3 588 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 SEMA6DQ8NFY4 1073 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 DVL3Q92997 716 aaPredicted RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 PAPOLGQ9BWT3 736 aaKnown RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 MND1Q9BWT6 205 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 YTHDF1Q9BYJ9 559 aaKnown RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 SLC22A4Q9H015 551 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 DECR2Q9NUI1 292 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 PIGLQ9Y2B2 252 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 RHBDD3Q9Y3P4 386 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 SIRT4Q9Y6E7 314 aaPredicted RBP11.58□□□□□ -0.56
SP140-213ENST00000543928 V9GYS6 101 aa11.58□□□□□ -0.56
SP140-213ENST00000543928 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms