RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C18orf65Q6ZTR6 163 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 ZNF572Q7Z3I7 529 aaPredicted RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 PIGWQ7Z7B1 504 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 Q8N2B8 174 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 LSMEM1Q8N8F7 131 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 Q8TCH9 128 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 ACMSDQ8TDX5 336 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 SPRYD4Q8WW59 207 aaPredicted RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 ASB10Q8WXI3 467 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 HDAC2Q92769 488 aaKnown RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 TNFRSF14Q92956 283 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 MAL2Q969L2 176 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 ERGIC1Q969X5 290 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 SPSB4Q96A44 273 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 SEH1LQ96EE3 360 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 DUS3LQ96G46 650 aaKnown RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 OR52E6Q96RD3 313 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 HCAR1Q9BXC0 346 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 MRPL13Q9BYD1 178 aaKnown RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 RERGLQ9H628 205 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 METTL8Q9H825 291 aaKnown RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 RMND5AQ9H871 391 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 SLC13A4Q9UKG4 626 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 PRPF19Q9UMS4 504 aaKnown RBP3.82□□□□□ -1.8
LIMS1-214ENST00000542845 AURKCQ9UQB9 309 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
LIMS1-214ENST00000542845 A0A0B4J2E0 115 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 A0A1B0GX12 115 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 A6NDX4 124 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SH2D7A6NKC9 451 aaPredicted RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 IQCF6A8MYZ5 107 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 E9PBE3 544 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 COPEO14579 308 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 RFXANKO14593 260 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ACOT8O14734 319 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SLC22A3O75751 556 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 INMTO95050 263 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 LHBP01229 141 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SELLP14151 372 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 MSR1P21757 451 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ALDH3A1P30838 453 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 PRKAR1BP31321 381 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 CD200P41217 278 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 CEBPDP49716 269 aaPredicted RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 DAP3P51398 398 aaKnown RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 UGT2B15P54855 530 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 UFM1P61960 85 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 TXNL4AP83876 142 aaKnown RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 RPL18Q07020 188 aaKnown RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 PCLAFQ15004 111 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ZNF74Q16587 644 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 MICBQ29980 383 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 LRRC10Q5BKY1 277 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 WDR38Q5JTN6 314 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 FBXW12Q6X9E4 464 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SLC36A1Q7Z2H8 476 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 HDDC2Q7Z4H3 204 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 MKXQ8IYA7 352 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 FAM185AQ8N0U4 392 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 DYNAPQ8N1N2 210 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 LNX2Q8N448 690 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 GCSAMQ8N6F7 178 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 OR52H1Q8NGJ2 320 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 OR9Q1Q8NGQ5 310 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 MOSPD2Q8NHP6 518 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 RPS4Y2Q8TD47 263 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 BCAS4Q8TDM0 211 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SLCO4A1Q96BD0 722 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 RASD2Q96D21 266 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 AJUBAQ96IF1 538 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 MCHR1Q99705 422 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 WFDC6Q9BQY6 131 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 TMEM43Q9BTV4 400 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 FUT8Q9BYC5 575 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 TINAGL1Q9GZM7 467 aaPredicted RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SEPSECSQ9HD40 501 aaKnown RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 INIPQ9NRY2 104 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SNTG1Q9NSN8 517 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ADA2Q9NZK5 511 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 BTNL2Q9UIR0 455 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ZNF391Q9UJN7 358 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 PITPNC1Q9UKF7 332 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 ZNF256Q9Y2P7 627 aaPredicted RBP3.81□□□□□ -1.8
LIMS1-214ENST00000542845 FRAS1Q86XX4 4008 aa3.81□□□□□ -1.8
LIMS1-214ENST00000542845 SMIM23A6NLE4 172 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 H7C1C5 153 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 M0R1W7 72 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 TPST2O60704 377 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 SNRNP70P08621 437 aaKnown RBP3.8□□□□□ -1.8
LIMS1-214ENST00000542845 COX5BP10606 129 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 JUNBP17275 347 aaPredicted RBP3.8□□□□□ -1.8
LIMS1-214ENST00000542845 FUT1P19526 365 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 MYF6P23409 242 aa3.8□□□□□ -1.8
LIMS1-214ENST00000542845 CD24P25063 80 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms