RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ZMYND19Q96E35 227 aaPredicted RBP17.48■□□□□ 0.39
CHFR-217ENST00000540537 REEP6Q96HR9 211 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 AMELYQ99218 206 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 NUDT16L1Q9BRJ7 211 aaKnown RBP17.48■□□□□ 0.39
CHFR-217ENST00000540537 C1orf123Q9NWV4 160 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 FAM53CQ9NYF3 392 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 DNAJB9Q9UBS3 223 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 NBEAL1Q6ZS30 2694 aa17.48■□□□□ 0.39
CHFR-217ENST00000540537 hCG_38984A0A1B0GV85 526 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 TCRBV3S1A0A5B6 114 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 PRODHO43272 600 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 FKBP6O75344 327 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 CFPP27918 469 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 NPY4RP50391 375 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 ZNF121P58317 390 aaPredicted RBP17.47■□□□□ 0.39
CHFR-217ENST00000540537 PLBD1Q6P4A8 553 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 FAM57BQ71RH2 274 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 HS3ST5Q8IZT8 346 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 PARP8Q8N3A8 854 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 ZNF454Q8N9F8 522 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 PAPD5Q8NDF8 572 aaKnown RBP17.47■□□□□ 0.39
CHFR-217ENST00000540537 OTOSQ8NHW6 89 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 SLC7A6OSQ96CW6 309 aaPredicted RBP17.47■□□□□ 0.39
CHFR-217ENST00000540537 OR10A2Q9H208 303 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 MMADHCQ9H3L0 296 aaPredicted RBP17.47■□□□□ 0.39
CHFR-217ENST00000540537 DNAJC27Q9NZQ0 273 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 POMPQ9Y244 141 aa17.47■□□□□ 0.39
CHFR-217ENST00000540537 TRAV38-1A0A0B4J264 116 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 NDUFA2O43678 99 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 DNAJC8O75937 253 aaPredicted RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 GRPP07492 148 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 LYNP07948 512 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 H2BFMP0C1H6 154 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 HOXA4Q00056 320 aaPredicted RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 OR8B8Q15620 311 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 SLC35D3Q5M8T2 416 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 SFRP4Q6FHJ7 346 aaPredicted RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 C9orf139Q6ZV77 190 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 BCL6BQ8N143 479 aaPredicted RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 OR8S1Q8NH09 359 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 MS4A7Q9GZW8 240 aaPredicted RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 RGCCQ9H4X1 137 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 ZMAT3Q9HA38 289 aaKnown RBP17.46■□□□□ 0.39
CHFR-217ENST00000540537 SLC25A19Q9HC21 320 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 ERVK-18Q9QC07 812 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 CTSZQ9UBR2 303 aa17.46■□□□□ 0.39
CHFR-217ENST00000540537 OOEPA6NGQ2 149 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 A6NLC8 198 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 C3orf80F5H4A9 247 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 TNFRSF13BO14836 293 aaPredicted RBP17.45■□□□□ 0.38
CHFR-217ENST00000540537 ENSAO43768 121 aaKnown RBP17.45■□□□□ 0.38
CHFR-217ENST00000540537 SELENOFO60613 162 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 IGHV4-38-2P0DP08 117 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 PRKACGP22612 351 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 SNCBQ16143 134 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 KLHL12Q53G59 568 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 ZNF826PQ6ZT77 177 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 CPOQ8IVL8 374 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 GCSAMQ8N6F7 178 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 BOLLQ8N9W6 283 aaKnown RBP17.45■□□□□ 0.38
CHFR-217ENST00000540537 CSNK2A3Q8NEV1 391 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 DNAJC9Q8WXX5 260 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 PGAM5Q96HS1 289 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 TEX12Q9BXU0 123 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 ZNF319Q9P2F9 582 aa17.45■□□□□ 0.38
CHFR-217ENST00000540537 hCG_1807616A0A1W2PRN6 198 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 C22orf46C9J442 243 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 PLATP00750 562 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 LHBP01229 141 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 PRTN3P24158 256 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 GSK3AP49840 483 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 CD276Q5ZPR3 534 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.44■□□□□ 0.38
CHFR-217ENST00000540537 THEM6Q8WUY1 208 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 NRBF2Q96F24 287 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 ZNF48Q96MX3 618 aaPredicted RBP17.44■□□□□ 0.38
CHFR-217ENST00000540537 TECTBQ96PL2 329 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 BRD7Q9NPI1 651 aa17.44■□□□□ 0.38
CHFR-217ENST00000540537 TRAV40A0A0B4J280 105 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 DNAJC9-AS1A6NH13 148 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 ADAM20O43506 726 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 TIPRLO75663 272 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 SLC2A5P22732 501 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 MTNR1AP48039 350 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 GFOD2Q3B7J2 385 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 TEX36Q5VZQ5 186 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 WDR86Q86TI4 376 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 FTMTQ8N4E7 242 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 NIPAL2Q9H841 368 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 RNPEPL1Q9HAU8 725 aa17.43■□□□□ 0.38
CHFR-217ENST00000540537 IGHV3OR16-10A0A075B7F0 116 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 GNALP38405 381 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 NAA10P41227 235 aaPredicted RBP17.42■□□□□ 0.38
CHFR-217ENST00000540537 PSMA6P60900 246 aaKnown RBP17.42■□□□□ 0.38
CHFR-217ENST00000540537 FGF12P61328 243 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 RPS7P62081 194 aaKnown RBP17.42■□□□□ 0.38
CHFR-217ENST00000540537 BAMBIQ13145 260 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 TMEM236Q5W0B7 351 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 FAM90A1Q86YD7 464 aa17.42■□□□□ 0.38
CHFR-217ENST00000540537 C11orf53Q8IXP5 236 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms