RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ARHGEF39Q8N4T4 335 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FAM181AQ8N9Y4 354 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 OR52E2Q8NGJ4 325 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 OR4K13Q8NH42 304 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PPP1R1CQ8WVI7 109 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 MRPS24Q96EL2 167 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CIB3Q96Q77 187 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 PRR14Q9BWN1 585 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 S1PR5Q9H228 398 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 OR51I2Q9H344 312 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 Q9N2K0 584 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CLEC5AQ9NY25 188 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 FKBP11Q9NYL4 201 aa5.48□□□□□ -1.53
PTPRD-214ENST00000540109 CARHSP1Q9Y2V2 147 aaKnown RBP5.48□□□□□ -1.53
PTPRD-214ENST00000540109 LOC100289279A0A1B0GTE1 492 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CEBPZOSA8MTT3 80 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 PRAMEF26H0Y7S4 382 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SOCS6O14544 535 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TNFP01375 233 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 GSTP1P09211 210 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SNRPNP63162 240 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 YBX1P67809 324 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SLC14A1Q13336 389 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF626Q68DY1 528 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SLC48A1Q6P1K1 146 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TMPPEQ6ZT21 453 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 C17orf78Q8N4C9 275 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MS4A6EQ96DS6 147 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ABHD14BQ96IU4 210 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TWSG1Q9GZX9 223 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CXorf36Q9H7Y0 433 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZMAT3Q9HA38 289 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 DNAJC4Q9NNZ3 241 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SLC35D1Q9NTN3 355 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SERTAD3Q9UJW9 196 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 K7EQS6 105 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 PLA2G10O15496 165 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 GNG7O60262 68 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ICOSLGO75144 302 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 C8orf89P0DMQ9 161 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 BTF3P20290 206 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 CD1CP29017 333 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 LINC00303Q3SY05 128 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF628Q5EBL2 1059 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ARSJQ5FYB0 599 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 C9orf135Q5VTT2 229 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TFAP2EQ6VUC0 442 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ABI3BPQ7Z7G0 1075 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ADGRE4PQ86SQ3 457 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SYT9Q86SS6 491 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MIB2Q96AX9 1013 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM19Q96HH6 336 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 FOXN4Q96NZ1 517 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 IL17FQ96PD4 163 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ARHGAP9Q9BRR9 750 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 PBX4Q9BYU1 374 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF430Q9H8G1 570 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SEC61A2Q9H9S3 476 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 LINC01387J3KSC0 135 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 NSA2O95478 260 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MT-ND6P03923 174 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 WNT1P04628 370 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 NT5EP21589 574 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 HSD11B1P28845 292 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MPGP29372 298 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SULT1A1P50225 295 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 IKZF1Q13422 519 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 PMCHL1Q16048 86 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MIDNQ504T8 468 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 LYG2Q86SG7 212 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF429Q86V71 674 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ZFP62Q8NB50 900 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 OR2G3Q8NGZ4 309 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MS4A4EQ96PG1 132 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 GPA33Q99795 319 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MBNL1Q9NR56 388 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 OR6C3Q9NZP0 311 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SLC23A2Q9UGH3 650 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 AK3Q9UIJ7 227 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SNRPCP09234 159 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 DCTDP32321 178 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 PDX1P52945 283 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MELKQ14680 651 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 SHHQ15465 462 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 RGS7BPQ6MZT1 257 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM217Q8N7C4 229 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 OR4N2Q8NGD1 307 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 GHSRQ92847 366 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ATP5SQ99766 215 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MED20Q9H944 212 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MYOTQ9UBF9 498 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 MMP17Q9ULZ9 603 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 DVL2O14641 736 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 ERI3O43414 337 aaKnown RBP5.47□□□□□ -1.53
PTPRD-214ENST00000540109 RECKO95980 971 aa5.47□□□□□ -1.53
PTPRD-214ENST00000540109 GP1BAP07359 652 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms